Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 FAM27E4-201ENST00000605259 342 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 AL512427.1-201ENST00000618593 349 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHFQ7M4L6 AC104260.2-201ENST00000623551 3497 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 AL031595.2-201ENST00000624215 19071 ntBASIC5.03□□□□□ -1.6
SHFQ7M4L6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHFQ7M4L6 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHFQ7M4L6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SHFQ7M4L6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHFQ7M4L6 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHFQ7M4L6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHFQ7M4L6 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHFQ7M4L6 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHFQ7M4L6 COX6B1P3-201ENST00000312310 260 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHFQ7M4L6 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHFQ7M4L6 RNU2-17P-201ENST00000410290 190 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 XKRYP4-201ENST00000414395 483 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC241520.1-201ENST00000422654 1099 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC093084.1-201ENST00000424233 687 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 HSPE1P16-201ENST00000426640 348 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHFQ7M4L6 NANOGP9-201ENST00000439890 892 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 RPS27P5-201ENST00000444247 244 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 XKRYP5-201ENST00000449659 483 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 HMGB1P5-202ENST00000451497 985 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC068228.1-201ENST00000461723 211 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 RPL21P47-201ENST00000483696 477 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC096571.1-202ENST00000506634 735 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 MTCYBP19-201ENST00000517463 1124 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 CIR1P1-201ENST00000524055 1133 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 OR5AM1P-201ENST00000532136 1032 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHFQ7M4L6 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AL845552.1-201ENST00000556820 323 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC106734.1-201ENST00000568646 663 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 BNIP3P41-202ENST00000616656 861 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC109809.1-201ENST00000619665 545 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC241377.1-201ENST00000619797 406 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC024884.1-201ENST00000620583 399 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 MIR6813-201ENST00000621638 56 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 AP000770.2-201ENST00000623694 100 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC019072.1-201ENST00000604535 1551 ntBASIC5.02□□□□□ -1.61
SHFQ7M4L6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHFQ7M4L6 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHFQ7M4L6 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.02□□□□□ -1.61
SHFQ7M4L6 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SHFQ7M4L6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHFQ7M4L6 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHFQ7M4L6 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHFQ7M4L6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
SHFQ7M4L6 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHFQ7M4L6 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHFQ7M4L6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHFQ7M4L6 HMGB1P10-201ENST00000395823 563 ntBASIC5.01□□□□□ -1.61
SHFQ7M4L6 AC096533.1-201ENST00000411645 353 ntBASIC5.01□□□□□ -1.61
SHFQ7M4L6 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.01□□□□□ -1.61
SHFQ7M4L6 AK4P4-201ENST00000419465 646 ntBASIC5.01□□□□□ -1.61
SHFQ7M4L6 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.01□□□□□ -1.61
SHFQ7M4L6 AC093716.1-201ENST00000435923 377 ntBASIC5.01□□□□□ -1.61
SHFQ7M4L6 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms