Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 AC126177.5-201ENST00000549599 178 ntBASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 AL049779.2-201ENST00000553847 315 ntBASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 AC027281.1-201ENST00000574178 758 ntBASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 AC016839.1-201ENST00000578162 867 ntBASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 AC020915.5-201ENST00000596836 964 ntBASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HIST2H2AA3Q6FI13 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AC006210.2-201ENST00000367074 1545 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 OR9K1P-201ENST00000326513 941 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 RNU6-670P-201ENST00000364312 104 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AC007618.1-201ENST00000366455 732 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 RPL21P67-201ENST00000402896 478 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AL389925.1-201ENST00000432257 728 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AL138787.1-202ENST00000437804 898 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 RAB28P3-201ENST00000448325 597 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 GTF2F2P1-201ENST00000511083 675 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 RNA5SP362-201ENST00000516048 118 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 RNU6-941P-201ENST00000516346 108 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 DUX4L52-201ENST00000549363 777 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 LSM3P2-201ENST00000551246 273 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AC006349.1-201ENST00000555526 235 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 PRPF19P1-201ENST00000584766 898 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AC011445.2-201ENST00000599274 173 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AC012213.4-201ENST00000606457 354 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 FAM72A-208ENST00000607379 1139 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AL359513.1-201ENST00000614364 557 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AF117829.2-201ENST00000619538 361 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 FRG1EP-201ENST00000634469 770 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 AL034549.2-201ENST00000618285 3373 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 TRIM51GP-201ENST00000534741 1350 ntBASIC5.04□□□□□ -1.6
HIST2H2AA3Q6FI13 SMG1P7-201ENST00000565246 2704 ntBASIC5.03□□□□□ -1.6
HIST2H2AA3Q6FI13 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HIST2H2AA3Q6FI13 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HIST2H2AA3Q6FI13 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HIST2H2AA3Q6FI13 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.03□□□□□ -1.6
HIST2H2AA3Q6FI13 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.03□□□□□ -1.6
HIST2H2AA3Q6FI13 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HIST2H2AA3Q6FI13 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.03□□□□□ -1.6
HIST2H2AA3Q6FI13 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HIST2H2AA3Q6FI13 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.03□□□□□ -1.6
HIST2H2AA3Q6FI13 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HIST2H2AA3Q6FI13 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms