Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.35□□□□□ -1.71
USF2Q15853 CACYBPP1-201ENST00000438592 684 ntBASIC4.35□□□□□ -1.71
USF2Q15853 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.35□□□□□ -1.71
USF2Q15853 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.35□□□□□ -1.71
USF2Q15853 RPL7AP52-201ENST00000458096 790 ntBASIC4.35□□□□□ -1.71
USF2Q15853 NXT1P1-201ENST00000458481 316 ntBASIC4.35□□□□□ -1.71
USF2Q15853 ATP5LP5-201ENST00000483050 299 ntBASIC4.35□□□□□ -1.71
USF2Q15853 PFN1P8-201ENST00000497012 543 ntBASIC4.35□□□□□ -1.71
USF2Q15853 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
USF2Q15853 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.35□□□□□ -1.71
USF2Q15853 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.35□□□□□ -1.71
USF2Q15853 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.35□□□□□ -1.71
USF2Q15853 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.35□□□□□ -1.71
USF2Q15853 RN7SKP253-201ENST00000516424 309 ntBASIC4.35□□□□□ -1.71
USF2Q15853 RNU6-347P-201ENST00000516658 105 ntBASIC4.35□□□□□ -1.71
USF2Q15853 AC021678.3-201ENST00000517893 476 ntBASIC4.35□□□□□ -1.71
USF2Q15853 PMS2P3-207ENST00000529061 717 ntBASIC4.35□□□□□ -1.71
USF2Q15853 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.35□□□□□ -1.71
USF2Q15853 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.35□□□□□ -1.71
USF2Q15853 AC122688.1-201ENST00000541494 223 ntBASIC4.35□□□□□ -1.71
USF2Q15853 AC006512.2-201ENST00000543250 486 ntBASIC4.35□□□□□ -1.71
USF2Q15853 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.35□□□□□ -1.71
USF2Q15853 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.35□□□□□ -1.71
USF2Q15853 AC025574.2-201ENST00000615621 514 ntBASIC4.35□□□□□ -1.71
USF2Q15853 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.35□□□□□ -1.71
USF2Q15853 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.35□□□□□ -1.71
USF2Q15853 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.35□□□□□ -1.71
USF2Q15853 AL133243.3-201ENST00000617415 3004 ntBASIC4.35□□□□□ -1.71
USF2Q15853 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
USF2Q15853 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
USF2Q15853 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
USF2Q15853 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USF2Q15853 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USF2Q15853 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.35□□□□□ -1.71
USF2Q15853 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.35□□□□□ -1.71
USF2Q15853 PHKBP1-201ENST00000450951 1951 ntBASIC4.34□□□□□ -1.71
USF2Q15853 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USF2Q15853 AC063976.2-201ENST00000425667 3556 ntBASIC4.34□□□□□ -1.71
USF2Q15853 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
USF2Q15853 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USF2Q15853 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
USF2Q15853 RNU1-150P-201ENST00000362491 162 ntBASIC4.34□□□□□ -1.71
USF2Q15853 RNA5SP30-201ENST00000365552 115 ntBASIC4.34□□□□□ -1.71
USF2Q15853 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.34□□□□□ -1.71
USF2Q15853 NENFP1-201ENST00000419476 466 ntBASIC4.34□□□□□ -1.71
USF2Q15853 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.34□□□□□ -1.71
USF2Q15853 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.34□□□□□ -1.71
USF2Q15853 NANOGP9-201ENST00000439890 892 ntBASIC4.34□□□□□ -1.71
USF2Q15853 SUMO2P1-206ENST00000445436 284 ntBASIC4.34□□□□□ -1.71
USF2Q15853 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.34□□□□□ -1.71
USF2Q15853 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USF2Q15853 NDUFS5P3-201ENST00000450668 321 ntBASIC4.34□□□□□ -1.71
USF2Q15853 RPSAP37-201ENST00000470913 821 ntBASIC4.34□□□□□ -1.71
USF2Q15853 RPS17P15-201ENST00000475609 349 ntBASIC4.34□□□□□ -1.71
USF2Q15853 ARL4AP1-201ENST00000503220 705 ntBASIC4.34□□□□□ -1.71
USF2Q15853 AC025458.1-201ENST00000506046 166 ntBASIC4.34□□□□□ -1.71
USF2Q15853 DUTP7-201ENST00000507982 486 ntBASIC4.34□□□□□ -1.71
USF2Q15853 AC114781.3-201ENST00000512083 142 ntBASIC4.34□□□□□ -1.71
USF2Q15853 RN7SKP46-201ENST00000515942 234 ntBASIC4.34□□□□□ -1.71
USF2Q15853 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.34□□□□□ -1.71
USF2Q15853 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.34□□□□□ -1.71
USF2Q15853 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.34□□□□□ -1.71
USF2Q15853 AC027369.2-201ENST00000528030 440 ntBASIC4.34□□□□□ -1.71
USF2Q15853 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.34□□□□□ -1.71
USF2Q15853 HSPE1P2-201ENST00000554777 306 ntBASIC4.34□□□□□ -1.71
USF2Q15853 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
USF2Q15853 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.34□□□□□ -1.71
USF2Q15853 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.34□□□□□ -1.71
USF2Q15853 HNRNPCP4-201ENST00000571636 900 ntBASIC4.34□□□□□ -1.71
USF2Q15853 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.34□□□□□ -1.71
USF2Q15853 MIR6071-201ENST00000616741 78 ntBASIC4.34□□□□□ -1.71
USF2Q15853 AC091932.2-201ENST00000623014 291 ntBASIC4.34□□□□□ -1.71
USF2Q15853 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.34□□□□□ -1.71
USF2Q15853 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.34□□□□□ -1.71
USF2Q15853 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.34□□□□□ -1.71
USF2Q15853 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.34□□□□□ -1.71
USF2Q15853 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.34□□□□□ -1.71
USF2Q15853 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.34□□□□□ -1.71
USF2Q15853 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
USF2Q15853 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USF2Q15853 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USF2Q15853 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USF2Q15853 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
USF2Q15853 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.71
USF2Q15853 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.34□□□□□ -1.71
USF2Q15853 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
USF2Q15853 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
USF2Q15853 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
USF2Q15853 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
USF2Q15853 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
USF2Q15853 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
USF2Q15853 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
USF2Q15853 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.33□□□□□ -1.72
USF2Q15853 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
USF2Q15853 CASC19-284ENST00000642142 1868 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms