Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH1Q08174 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDH1Q08174 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH1Q08174 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH1Q08174 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
PCDH1Q08174 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH1Q08174 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH1Q08174 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH1Q08174 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDH1Q08174 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PCDH1Q08174 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH1Q08174 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
PCDH1Q08174 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH1Q08174 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDH1Q08174 AL133243.2-201ENST00000610331 1621 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH1Q08174 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDH1Q08174 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH1Q08174 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH1Q08174 AC007993.1-201ENST00000621298 2430 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH1Q08174 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDH1Q08174 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH1Q08174 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH1Q08174 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH1Q08174 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PCDH1Q08174 RPL24P4-201ENST00000326586 421 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 RNU12-2P-201ENST00000364789 156 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH1Q08174 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH1Q08174 HMGB3P23-201ENST00000414981 585 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AL389915.1-201ENST00000422463 466 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDH1Q08174 DPY19L1P2-201ENST00000426647 915 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 Z93242.1-201ENST00000427102 353 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDH1Q08174 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AC104306.1-201ENST00000449702 371 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AC005517.1-201ENST00000452091 489 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AC083806.1-201ENST00000468934 316 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 AP000852.1-201ENST00000472460 573 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 AL079303.1-201ENST00000486611 463 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AC010409.2-201ENST00000505780 478 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH1Q08174 AC011352.2-201ENST00000514574 1016 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AC087276.1-201ENST00000529659 480 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 AP006587.5-201ENST00000532033 739 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 AP002812.4-201ENST00000532139 286 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 NXPE2P1-201ENST00000543705 726 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDH1Q08174 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AP001004.1-201ENST00000582468 324 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AL117336.2-201ENST00000602435 335 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 AL031429.2-201ENST00000602605 649 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 CYCSP1-201ENST00000604815 315 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 AC092681.3-201ENST00000609463 678 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AC126177.8-201ENST00000618339 1015 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 AL158209.2-201ENST00000619266 216 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 OR1N1-202ENST00000619659 939 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 AP005212.3-201ENST00000619964 528 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
PCDH1Q08174 AP000648.2-201ENST00000624182 404 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 AC124864.2-201ENST00000624736 186 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDH1Q08174 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDH1Q08174 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH1Q08174 MAPK10-357ENST00000641831 2858 ntBASIC6.68□□□□□ -1.34
PCDH1Q08174 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH1Q08174 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH1Q08174 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH1Q08174 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH1Q08174 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PCDH1Q08174 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH1Q08174 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.68□□□□□ -1.34
PCDH1Q08174 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
PCDH1Q08174 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PCDH1Q08174 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDH1Q08174 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDH1Q08174 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH1Q08174 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDH1Q08174 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDH1Q08174 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDH1Q08174 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms