Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBA52P62987 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
UBA52P62987 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.51□□□□□ -1.69
UBA52P62987 RN7SKP199-201ENST00000410325 305 ntBASIC4.51□□□□□ -1.69
UBA52P62987 RN7SKP216-201ENST00000411050 312 ntBASIC4.51□□□□□ -1.69
UBA52P62987 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.51□□□□□ -1.69
UBA52P62987 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.51□□□□□ -1.69
UBA52P62987 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.51□□□□□ -1.69
UBA52P62987 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.51□□□□□ -1.69
UBA52P62987 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.51□□□□□ -1.69
UBA52P62987 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.51□□□□□ -1.69
UBA52P62987 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.51□□□□□ -1.69
UBA52P62987 RN7SL222P-201ENST00000476452 299 ntBASIC4.51□□□□□ -1.69
UBA52P62987 RPL7AP6-201ENST00000477943 801 ntBASIC4.51□□□□□ -1.69
UBA52P62987 ARL4AP1-201ENST00000503220 705 ntBASIC4.51□□□□□ -1.69
UBA52P62987 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.51□□□□□ -1.69
UBA52P62987 PGAM1P13-201ENST00000507497 754 ntBASIC4.51□□□□□ -1.69
UBA52P62987 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBA52P62987 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.51□□□□□ -1.69
UBA52P62987 SNORA26.10-201ENST00000516427 141 ntBASIC4.51□□□□□ -1.69
UBA52P62987 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.51□□□□□ -1.69
UBA52P62987 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.51□□□□□ -1.69
UBA52P62987 AC022884.2-201ENST00000578535 580 ntBASIC4.51□□□□□ -1.69
UBA52P62987 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.51□□□□□ -1.69
UBA52P62987 AC012616.1-201ENST00000600294 197 ntBASIC4.51□□□□□ -1.69
UBA52P62987 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.51□□□□□ -1.69
UBA52P62987 AC090510.2-201ENST00000617465 629 ntBASIC4.51□□□□□ -1.69
UBA52P62987 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBA52P62987 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBA52P62987 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.51□□□□□ -1.69
UBA52P62987 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.51□□□□□ -1.69
UBA52P62987 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBA52P62987 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBA52P62987 SOCS5P3-201ENST00000425115 1576 ntBASIC4.51□□□□□ -1.69
UBA52P62987 AL138820.1-201ENST00000617901 5305 ntBASIC4.51□□□□□ -1.69
UBA52P62987 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBA52P62987 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
UBA52P62987 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.51□□□□□ -1.69
UBA52P62987 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBA52P62987 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UBA52P62987 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
UBA52P62987 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UBA52P62987 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
UBA52P62987 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UBA52P62987 AL513548.1-201ENST00000562904 1724 ntBASIC4.5□□□□□ -1.69
UBA52P62987 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UBA52P62987 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
UBA52P62987 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.5□□□□□ -1.69
UBA52P62987 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
UBA52P62987 AL645733.1-201ENST00000402250 217 ntBASIC4.5□□□□□ -1.69
UBA52P62987 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
UBA52P62987 GABARAPL3-201ENST00000412799 354 ntBASIC4.5□□□□□ -1.69
UBA52P62987 RPS6P23-201ENST00000413224 722 ntBASIC4.5□□□□□ -1.69
UBA52P62987 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.5□□□□□ -1.69
UBA52P62987 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.5□□□□□ -1.69
UBA52P62987 AL133325.1-201ENST00000421090 382 ntBASIC4.5□□□□□ -1.69
UBA52P62987 FTLP19-201ENST00000433300 394 ntBASIC4.5□□□□□ -1.69
UBA52P62987 AC046176.1-201ENST00000435260 1170 ntBASIC4.5□□□□□ -1.69
UBA52P62987 AC006335.2-201ENST00000437993 330 ntBASIC4.5□□□□□ -1.69
UBA52P62987 AL772161.1-201ENST00000439130 476 ntBASIC4.5□□□□□ -1.69
UBA52P62987 CEACAMP7-201ENST00000444105 496 ntBASIC4.5□□□□□ -1.69
UBA52P62987 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UBA52P62987 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.5□□□□□ -1.69
UBA52P62987 AC112206.1-201ENST00000468416 477 ntBASIC4.5□□□□□ -1.69
UBA52P62987 CBX1P5-201ENST00000475330 559 ntBASIC4.5□□□□□ -1.69
UBA52P62987 RN7SL447P-201ENST00000494711 245 ntBASIC4.5□□□□□ -1.69
UBA52P62987 RPS26P24-201ENST00000497656 331 ntBASIC4.5□□□□□ -1.69
UBA52P62987 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.5□□□□□ -1.69
UBA52P62987 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.5□□□□□ -1.69
UBA52P62987 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.5□□□□□ -1.69
UBA52P62987 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.5□□□□□ -1.69
UBA52P62987 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.5□□□□□ -1.69
UBA52P62987 AC022832.1-201ENST00000530718 645 ntBASIC4.5□□□□□ -1.69
UBA52P62987 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UBA52P62987 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.5□□□□□ -1.69
UBA52P62987 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.5□□□□□ -1.69
UBA52P62987 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.5□□□□□ -1.69
UBA52P62987 RN7SL708P-201ENST00000580952 299 ntBASIC4.5□□□□□ -1.69
UBA52P62987 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.5□□□□□ -1.69
UBA52P62987 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.5□□□□□ -1.69
UBA52P62987 AP002884.5-201ENST00000595053 1132 ntBASIC4.5□□□□□ -1.69
UBA52P62987 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UBA52P62987 MIR6748-201ENST00000610433 71 ntBASIC4.5□□□□□ -1.69
UBA52P62987 Mico1.1-201ENST00000611698 204 ntBASIC4.5□□□□□ -1.69
UBA52P62987 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.5□□□□□ -1.69
UBA52P62987 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.5□□□□□ -1.69
UBA52P62987 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.5□□□□□ -1.69
UBA52P62987 AL596275.2-204ENST00000641628 552 ntBASIC4.5□□□□□ -1.69
UBA52P62987 AL596275.2-206ENST00000641957 626 ntBASIC4.5□□□□□ -1.69
UBA52P62987 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
UBA52P62987 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UBA52P62987 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.5□□□□□ -1.69
UBA52P62987 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
UBA52P62987 AC003973.3-201ENST00000624863 2822 ntBASIC4.5□□□□□ -1.69
UBA52P62987 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBA52P62987 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
UBA52P62987 AL450345.1-202ENST00000605741 3881 ntBASIC4.49□□□□□ -1.69
UBA52P62987 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
UBA52P62987 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.49□□□□□ -1.69
UBA52P62987 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms