Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ACTBP60709 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
ACTBP60709 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.5□□□□□ -1.69
ACTBP60709 UBBP2-201ENST00000376781 231 ntBASIC4.5□□□□□ -1.69
ACTBP60709 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ACTBP60709 AC019155.1-201ENST00000382242 574 ntBASIC4.5□□□□□ -1.69
ACTBP60709 RN7SKP16-201ENST00000410180 299 ntBASIC4.5□□□□□ -1.69
ACTBP60709 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.5□□□□□ -1.69
ACTBP60709 RPL34P3-201ENST00000421454 338 ntBASIC4.5□□□□□ -1.69
ACTBP60709 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ACTBP60709 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.5□□□□□ -1.69
ACTBP60709 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.5□□□□□ -1.69
ACTBP60709 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.5□□□□□ -1.69
ACTBP60709 NPM1P48-201ENST00000436002 853 ntBASIC4.5□□□□□ -1.69
ACTBP60709 AL138787.1-202ENST00000437804 898 ntBASIC4.5□□□□□ -1.69
ACTBP60709 RPL12P11-201ENST00000439970 501 ntBASIC4.5□□□□□ -1.69
ACTBP60709 AC005297.1-201ENST00000444765 862 ntBASIC4.5□□□□□ -1.69
ACTBP60709 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ACTBP60709 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.5□□□□□ -1.69
ACTBP60709 BTF3P6-201ENST00000448054 499 ntBASIC4.5□□□□□ -1.69
ACTBP60709 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
ACTBP60709 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.5□□□□□ -1.69
ACTBP60709 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ACTBP60709 RN7SL346P-201ENST00000491561 294 ntBASIC4.5□□□□□ -1.69
ACTBP60709 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ACTBP60709 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
ACTBP60709 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ACTBP60709 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.5□□□□□ -1.69
ACTBP60709 SNORA43.3-201ENST00000517240 103 ntBASIC4.5□□□□□ -1.69
ACTBP60709 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.5□□□□□ -1.69
ACTBP60709 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.5□□□□□ -1.69
ACTBP60709 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.5□□□□□ -1.69
ACTBP60709 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.5□□□□□ -1.69
ACTBP60709 RN7SL708P-201ENST00000580952 299 ntBASIC4.5□□□□□ -1.69
ACTBP60709 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.5□□□□□ -1.69
ACTBP60709 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.5□□□□□ -1.69
ACTBP60709 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.5□□□□□ -1.69
ACTBP60709 AC011626.1-201ENST00000604710 562 ntBASIC4.5□□□□□ -1.69
ACTBP60709 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.5□□□□□ -1.69
ACTBP60709 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.5□□□□□ -1.69
ACTBP60709 AL356752.1-201ENST00000615844 593 ntBASIC4.5□□□□□ -1.69
ACTBP60709 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.5□□□□□ -1.69
ACTBP60709 AC009704.2-201ENST00000618739 483 ntBASIC4.5□□□□□ -1.69
ACTBP60709 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.5□□□□□ -1.69
ACTBP60709 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.5□□□□□ -1.69
ACTBP60709 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
ACTBP60709 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ACTBP60709 VPS35P1-201ENST00000563400 1518 ntBASIC4.5□□□□□ -1.69
ACTBP60709 KARSP1-201ENST00000451871 1752 ntBASIC4.5□□□□□ -1.69
ACTBP60709 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
ACTBP60709 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ACTBP60709 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
ACTBP60709 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
ACTBP60709 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
ACTBP60709 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
ACTBP60709 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.49□□□□□ -1.69
ACTBP60709 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
ACTBP60709 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
ACTBP60709 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ACTBP60709 VN2R3P-201ENST00000422626 1412 ntBASIC4.49□□□□□ -1.69
ACTBP60709 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ACTBP60709 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ACTBP60709 AC107068.1-201ENST00000563286 4218 ntBASIC4.49□□□□□ -1.69
ACTBP60709 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ACTBP60709 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ACTBP60709 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ACTBP60709 RNA5SP131-201ENST00000365452 119 ntBASIC4.49□□□□□ -1.69
ACTBP60709 RNA5SP284-201ENST00000384547 118 ntBASIC4.49□□□□□ -1.69
ACTBP60709 AC104297.1-201ENST00000393779 870 ntBASIC4.49□□□□□ -1.69
ACTBP60709 NCSTNP1-201ENST00000406229 144 ntBASIC4.49□□□□□ -1.69
ACTBP60709 EIF4A1P3-201ENST00000411521 244 ntBASIC4.49□□□□□ -1.69
ACTBP60709 SEPT7P8-201ENST00000413308 775 ntBASIC4.49□□□□□ -1.69
ACTBP60709 AC013429.2-201ENST00000418798 781 ntBASIC4.49□□□□□ -1.69
ACTBP60709 NAP1L4P2-201ENST00000425958 899 ntBASIC4.49□□□□□ -1.69
ACTBP60709 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.49□□□□□ -1.69
ACTBP60709 AL161722.2-201ENST00000434731 981 ntBASIC4.49□□□□□ -1.69
ACTBP60709 OR6D1P-201ENST00000436165 939 ntBASIC4.49□□□□□ -1.69
ACTBP60709 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.49□□□□□ -1.69
ACTBP60709 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.49□□□□□ -1.69
ACTBP60709 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.49□□□□□ -1.69
ACTBP60709 AL450996.1-201ENST00000445574 1202 ntBASIC4.49□□□□□ -1.69
ACTBP60709 AC022431.1-201ENST00000450941 438 ntBASIC4.49□□□□□ -1.69
ACTBP60709 CYCSP34-201ENST00000458172 304 ntBASIC4.49□□□□□ -1.69
ACTBP60709 GYG1P1-201ENST00000460864 698 ntBASIC4.49□□□□□ -1.69
ACTBP60709 RN7SL189P-201ENST00000468631 289 ntBASIC4.49□□□□□ -1.69
ACTBP60709 AC007998.1-201ENST00000474156 672 ntBASIC4.49□□□□□ -1.69
ACTBP60709 RN7SL447P-201ENST00000494711 245 ntBASIC4.49□□□□□ -1.69
ACTBP60709 PSMA2P2-201ENST00000504319 686 ntBASIC4.49□□□□□ -1.69
ACTBP60709 SNORD46.2-201ENST00000516021 102 ntBASIC4.49□□□□□ -1.69
ACTBP60709 RNA5SP360-201ENST00000516555 118 ntBASIC4.49□□□□□ -1.69
ACTBP60709 SCARNA16.4-201ENST00000516956 187 ntBASIC4.49□□□□□ -1.69
ACTBP60709 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.49□□□□□ -1.69
ACTBP60709 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
ACTBP60709 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.49□□□□□ -1.69
ACTBP60709 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC4.49□□□□□ -1.69
ACTBP60709 AC090888.3-201ENST00000558917 509 ntBASIC4.49□□□□□ -1.69
ACTBP60709 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.49□□□□□ -1.69
ACTBP60709 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.49□□□□□ -1.69
ACTBP60709 MIR4310-201ENST00000582950 57 ntBASIC4.49□□□□□ -1.69
ACTBP60709 PPATP2-201ENST00000605635 508 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms