Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AL133406.3-201ENST00000606817 541 ntBASIC3.77□□□□□ -1.81
FOXA3P55318 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXA3P55318 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXA3P55318 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXA3P55318 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.77□□□□□ -1.81
FOXA3P55318 MIR6774-201ENST00000614651 70 ntBASIC3.77□□□□□ -1.81
FOXA3P55318 AC131238.1-201ENST00000617135 328 ntBASIC3.77□□□□□ -1.81
FOXA3P55318 AC005899.6-201ENST00000620729 297 ntBASIC3.77□□□□□ -1.81
FOXA3P55318 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXA3P55318 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
FOXA3P55318 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.77□□□□□ -1.81
FOXA3P55318 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
FOXA3P55318 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
FOXA3P55318 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
FOXA3P55318 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXA3P55318 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
FOXA3P55318 AC005332.5-201ENST00000591222 2919 ntBASIC3.77□□□□□ -1.81
FOXA3P55318 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXA3P55318 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXA3P55318 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXA3P55318 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
FOXA3P55318 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.76□□□□□ -1.81
FOXA3P55318 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXA3P55318 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXA3P55318 CASC19-204ENST00000641001 2055 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXA3P55318 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXA3P55318 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXA3P55318 GAPDHP15-201ENST00000398586 975 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXA3P55318 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXA3P55318 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXA3P55318 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXA3P55318 AC013470.3-201ENST00000420252 1194 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 AL354893.1-201ENST00000433735 348 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXA3P55318 DEFB109F-201ENST00000491870 277 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 AC122718.2-201ENST00000505325 591 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 AC021146.3-201ENST00000511911 260 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC3.76□□□□□ -1.81
FOXA3P55318 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXA3P55318 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXA3P55318 RN7SKP99-201ENST00000517028 307 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 AC022882.1-201ENST00000532142 501 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXA3P55318 RBM22P12-201ENST00000567098 1255 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 AC092121.1-201ENST00000569452 202 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 MIR4675-201ENST00000577898 77 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 AP001496.3-201ENST00000580230 913 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.76□□□□□ -1.81
FOXA3P55318 AP002884.5-201ENST00000595053 1132 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 AL034374.2-201ENST00000605281 548 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXA3P55318 uc_338.18-201ENST00000615451 175 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 AC140113.4-201ENST00000622087 222 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 AC129778.1-202ENST00000623812 261 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 CU639417.4-201ENST00000623928 207 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 AP003499.2-201ENST00000624100 483 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXA3P55318 AL591379.1-207ENST00000635982 261 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 AMYH02020865.1-205ENST00000636189 261 ntBASIC3.76□□□□□ -1.81
FOXA3P55318 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXA3P55318 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXA3P55318 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXA3P55318 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXA3P55318 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXA3P55318 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
FOXA3P55318 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXA3P55318 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
FOXA3P55318 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
FOXA3P55318 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.75□□□□□ -1.81
FOXA3P55318 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXA3P55318 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXA3P55318 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXA3P55318 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXA3P55318 AC108751.5-201ENST00000492880 1336 ntBASIC3.75□□□□□ -1.81
FOXA3P55318 AC245100.2-201ENST00000454544 1679 ntBASIC3.75□□□□□ -1.81
FOXA3P55318 OR51H2P-202ENST00000641424 3046 ntBASIC3.75□□□□□ -1.81
FOXA3P55318 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
FOXA3P55318 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
FOXA3P55318 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
FOXA3P55318 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.75□□□□□ -1.81
FOXA3P55318 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.75□□□□□ -1.81
FOXA3P55318 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
FOXA3P55318 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
FOXA3P55318 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
FOXA3P55318 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
FOXA3P55318 RNU1-83P-201ENST00000363426 164 ntBASIC3.75□□□□□ -1.81
FOXA3P55318 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
FOXA3P55318 SNORA2.3-201ENST00000383920 135 ntBASIC3.75□□□□□ -1.81
FOXA3P55318 SNORA66-201ENST00000384792 133 ntBASIC3.75□□□□□ -1.81
FOXA3P55318 HMGN1P20-201ENST00000411849 300 ntBASIC3.75□□□□□ -1.81
FOXA3P55318 VDAC1P9-201ENST00000412766 841 ntBASIC3.75□□□□□ -1.81
FOXA3P55318 AC009237.10-201ENST00000414112 510 ntBASIC3.75□□□□□ -1.81
FOXA3P55318 Z93019.1-201ENST00000416450 973 ntBASIC3.75□□□□□ -1.81
FOXA3P55318 AC073136.2-201ENST00000417282 849 ntBASIC3.75□□□□□ -1.81
FOXA3P55318 QRSL1P2-201ENST00000418582 964 ntBASIC3.75□□□□□ -1.81
FOXA3P55318 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC3.75□□□□□ -1.81
FOXA3P55318 RPS29P10-201ENST00000439197 166 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms