Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AP001005.3-201ENST00000622049 129 ntBASIC5.48□□□□□ -1.53
NR1H2P55055 AC007683.2-201ENST00000624681 714 ntBASIC5.48□□□□□ -1.53
NR1H2P55055 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NR1H2P55055 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.48□□□□□ -1.53
NR1H2P55055 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.48□□□□□ -1.53
NR1H2P55055 ABCC13-202ENST00000463099 3842 ntBASIC5.48□□□□□ -1.53
NR1H2P55055 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.48□□□□□ -1.53
NR1H2P55055 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.48□□□□□ -1.53
NR1H2P55055 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NR1H2P55055 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.47□□□□□ -1.53
NR1H2P55055 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NR1H2P55055 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NR1H2P55055 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NR1H2P55055 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.47□□□□□ -1.53
NR1H2P55055 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
NR1H2P55055 AC009313.2-201ENST00000417893 1941 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.47□□□□□ -1.53
NR1H2P55055 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NR1H2P55055 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NR1H2P55055 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NR1H2P55055 SNORA51.1-201ENST00000363243 140 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 RNA5SP346-201ENST00000363541 121 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 RNU6-304P-201ENST00000364855 107 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.47□□□□□ -1.53
NR1H2P55055 RNU1-74P-201ENST00000384108 171 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 AP002784.2-201ENST00000397300 549 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.47□□□□□ -1.53
NR1H2P55055 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.47□□□□□ -1.53
NR1H2P55055 AC048351.1-201ENST00000420064 602 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 EIF4A1P1-201ENST00000420241 934 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.47□□□□□ -1.53
NR1H2P55055 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.47□□□□□ -1.53
NR1H2P55055 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.47□□□□□ -1.53
NR1H2P55055 AC005189.1-201ENST00000431286 310 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NR1H2P55055 OR3D1P-201ENST00000438288 955 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NR1H2P55055 AC099063.2-201ENST00000446360 662 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 PPIAP27-201ENST00000453800 265 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.47□□□□□ -1.53
NR1H2P55055 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.47□□□□□ -1.53
NR1H2P55055 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.47□□□□□ -1.53
NR1H2P55055 SEPT10P1-201ENST00000517342 1162 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 SOX5P1-201ENST00000524155 1127 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 AP003396.4-201ENST00000527574 265 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.47□□□□□ -1.53
NR1H2P55055 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
NR1H2P55055 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.47□□□□□ -1.53
NR1H2P55055 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.47□□□□□ -1.53
NR1H2P55055 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NR1H2P55055 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.47□□□□□ -1.53
NR1H2P55055 CYCSP38-201ENST00000559840 322 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 AC007346.1-201ENST00000569208 867 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 MIR3614-201ENST00000581261 86 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.47□□□□□ -1.53
NR1H2P55055 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.47□□□□□ -1.53
NR1H2P55055 AC008759.3-201ENST00000613300 508 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.47□□□□□ -1.53
NR1H2P55055 AC068880.4-201ENST00000623082 495 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 AP002967.1-201ENST00000624203 539 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 FRG1EP-201ENST00000634469 770 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NR1H2P55055 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
NR1H2P55055 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.47□□□□□ -1.53
NR1H2P55055 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NR1H2P55055 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NR1H2P55055 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NR1H2P55055 MRE11P1-201ENST00000464884 2127 ntBASIC5.47□□□□□ -1.53
NR1H2P55055 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
NR1H2P55055 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.47□□□□□ -1.53
NR1H2P55055 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
NR1H2P55055 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
NR1H2P55055 AC091305.2-201ENST00000624049 1576 ntBASIC5.46□□□□□ -1.53
NR1H2P55055 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.46□□□□□ -1.53
NR1H2P55055 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
NR1H2P55055 STX3-208ENST00000641815 3236 ntBASIC5.46□□□□□ -1.53
NR1H2P55055 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
NR1H2P55055 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NR1H2P55055 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.46□□□□□ -1.54
NR1H2P55055 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.46□□□□□ -1.54
NR1H2P55055 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NR1H2P55055 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
NR1H2P55055 AL445437.1-201ENST00000623157 3087 ntBASIC5.46□□□□□ -1.54
NR1H2P55055 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NR1H2P55055 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NR1H2P55055 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NR1H2P55055 RNU6-796P-201ENST00000391086 107 ntBASIC5.46□□□□□ -1.54
NR1H2P55055 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NR1H2P55055 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.46□□□□□ -1.54
NR1H2P55055 AL158825.1-201ENST00000414735 521 ntBASIC5.46□□□□□ -1.54
NR1H2P55055 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.46□□□□□ -1.54
NR1H2P55055 RPS7P8-201ENST00000418311 581 ntBASIC5.46□□□□□ -1.54
NR1H2P55055 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.46□□□□□ -1.54
NR1H2P55055 GNG5P5-201ENST00000420444 220 ntBASIC5.46□□□□□ -1.54
NR1H2P55055 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.46□□□□□ -1.54
NR1H2P55055 AC066692.1-201ENST00000421721 457 ntBASIC5.46□□□□□ -1.54
NR1H2P55055 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.46□□□□□ -1.54
NR1H2P55055 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.46□□□□□ -1.54
NR1H2P55055 ETF1P3-201ENST00000430422 1160 ntBASIC5.46□□□□□ -1.54
NR1H2P55055 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms