Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LIMK1P53667 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.5□□□□□ -1.53
LIMK1P53667 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.5□□□□□ -1.53
LIMK1P53667 AC004158.1-201ENST00000564508 4319 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 AC011493.1-201ENST00000596753 1632 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.5□□□□□ -1.53
LIMK1P53667 RNU4-44P-201ENST00000363050 141 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK1P53667 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LIMK1P53667 MIR192-201ENST00000384915 110 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
LIMK1P53667 CHMP1B2P-201ENST00000399581 597 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.5□□□□□ -1.53
LIMK1P53667 NIFKP3-201ENST00000417799 865 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 AC093084.1-201ENST00000424233 687 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 FAM204CP-201ENST00000424489 642 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.5□□□□□ -1.53
LIMK1P53667 FAM96AP1-201ENST00000430879 482 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 NDUFA5P1-201ENST00000433858 341 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.5□□□□□ -1.53
LIMK1P53667 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.5□□□□□ -1.53
LIMK1P53667 AL162739.1-201ENST00000450606 307 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK1P53667 RPS29P33-201ENST00000456717 146 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 AC092324.1-201ENST00000468671 324 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.5□□□□□ -1.53
LIMK1P53667 RN7SL481P-201ENST00000477764 299 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.5□□□□□ -1.53
LIMK1P53667 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.5□□□□□ -1.53
LIMK1P53667 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.5□□□□□ -1.53
LIMK1P53667 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.5□□□□□ -1.53
LIMK1P53667 BLZF2P-201ENST00000553776 1130 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.5□□□□□ -1.53
LIMK1P53667 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.5□□□□□ -1.53
LIMK1P53667 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.5□□□□□ -1.53
LIMK1P53667 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.5□□□□□ -1.53
LIMK1P53667 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.5□□□□□ -1.53
LIMK1P53667 AC006115.2-201ENST00000596823 202 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 AC073111.2-201ENST00000605657 1075 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 AC084036.1-201ENST00000609190 508 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 AL592494.3-201ENST00000609485 464 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.5□□□□□ -1.53
LIMK1P53667 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.5□□□□□ -1.53
LIMK1P53667 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.5□□□□□ -1.53
LIMK1P53667 AC119674.1-220ENST00000641502 1048 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK1P53667 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK1P53667 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LIMK1P53667 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
LIMK1P53667 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.5□□□□□ -1.53
LIMK1P53667 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIMK1P53667 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.5□□□□□ -1.53
LIMK1P53667 AC114774.1-201ENST00000507410 1770 ntBASIC5.5□□□□□ -1.53
LIMK1P53667 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.5□□□□□ -1.53
LIMK1P53667 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
LIMK1P53667 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.49□□□□□ -1.53
LIMK1P53667 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.49□□□□□ -1.53
LIMK1P53667 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
LIMK1P53667 AL121950.1-201ENST00000624993 2077 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
LIMK1P53667 MAPK10-338ENST00000641647 3362 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LIMK1P53667 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
LIMK1P53667 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LIMK1P53667 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LIMK1P53667 RNU4-4P-201ENST00000364588 130 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 BMS1P3-201ENST00000372011 932 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.49□□□□□ -1.53
LIMK1P53667 AL358178.1-201ENST00000407698 397 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.49□□□□□ -1.53
LIMK1P53667 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LIMK1P53667 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.49□□□□□ -1.53
LIMK1P53667 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.49□□□□□ -1.53
LIMK1P53667 AC093655.2-201ENST00000425735 631 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LIMK1P53667 AL360081.1-201ENST00000428299 555 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 RBMY2QP-201ENST00000429799 1147 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.49□□□□□ -1.53
LIMK1P53667 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LIMK1P53667 AP000936.3-201ENST00000438127 255 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 BUD31P2-201ENST00000449374 300 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.49□□□□□ -1.53
LIMK1P53667 OR52A4P-202ENST00000481634 799 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.49□□□□□ -1.53
LIMK1P53667 PDCL3P4-201ENST00000489621 720 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 AC105233.1-201ENST00000498840 781 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
LIMK1P53667 AC110775.1-201ENST00000513721 462 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.49□□□□□ -1.53
LIMK1P53667 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.49□□□□□ -1.53
LIMK1P53667 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.49□□□□□ -1.53
LIMK1P53667 OR11J2P-201ENST00000555298 907 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 RPL10P14-201ENST00000565265 298 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 AC114947.2-201ENST00000565748 2125 ntBASIC5.49□□□□□ -1.53
LIMK1P53667 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.49□□□□□ -1.53
LIMK1P53667 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.49□□□□□ -1.53
LIMK1P53667 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.49□□□□□ -1.53
LIMK1P53667 AC095055.1-201ENST00000603472 1113 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms