Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AP004372.1-201ENST00000604842 844 ntBASIC6.13□□□□□ -1.43
CPT1AP50416 AC109583.2-201ENST00000617367 129 ntBASIC6.13□□□□□ -1.43
CPT1AP50416 AP003476.1-201ENST00000623984 516 ntBASIC6.13□□□□□ -1.43
CPT1AP50416 AC004808.1-201ENST00000627671 721 ntBASIC6.13□□□□□ -1.43
CPT1AP50416 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CPT1AP50416 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CPT1AP50416 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
CPT1AP50416 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CPT1AP50416 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.13□□□□□ -1.43
CPT1AP50416 AC112255.1-201ENST00000624070 2493 ntBASIC6.13□□□□□ -1.43
CPT1AP50416 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 RNA5SP443-201ENST00000363083 132 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.12□□□□□ -1.43
CPT1AP50416 MIR122-201ENST00000385044 85 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CPT1AP50416 GSTA12P-201ENST00000402398 508 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 DUTP5-201ENST00000406790 469 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 RNA5SP487-201ENST00000410186 122 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CPT1AP50416 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.12□□□□□ -1.43
CPT1AP50416 GSTM5P1-201ENST00000434751 660 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 AL606517.1-201ENST00000446914 387 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 AL161722.1-201ENST00000446972 1032 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 AC073850.1-201ENST00000449243 255 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CPT1AP50416 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.12□□□□□ -1.43
CPT1AP50416 HAUS1P1-201ENST00000505275 832 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 RNU6-941P-201ENST00000516346 108 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 AP003355.1-201ENST00000518956 587 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 OR4A17P-201ENST00000526032 904 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 OR5D15P-201ENST00000531671 942 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.12□□□□□ -1.43
CPT1AP50416 OR8X1P-201ENST00000534542 869 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
CPT1AP50416 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.12□□□□□ -1.43
CPT1AP50416 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.12□□□□□ -1.43
CPT1AP50416 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 AC006116.3-201ENST00000592968 361 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 AP002884.5-201ENST00000595053 1132 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.12□□□□□ -1.43
CPT1AP50416 Mico1.1-201ENST00000611698 204 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.12□□□□□ -1.43
CPT1AP50416 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.12□□□□□ -1.43
CPT1AP50416 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.12□□□□□ -1.43
CPT1AP50416 AP002799.1-201ENST00000623552 423 ntBASIC6.12□□□□□ -1.43
CPT1AP50416 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.12□□□□□ -1.43
CPT1AP50416 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.12□□□□□ -1.43
CPT1AP50416 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CPT1AP50416 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.12□□□□□ -1.43
CPT1AP50416 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CPT1AP50416 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CPT1AP50416 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CPT1AP50416 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CPT1AP50416 AL442128.2-201ENST00000620246 1824 ntBASIC6.11□□□□□ -1.43
CPT1AP50416 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CPT1AP50416 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CPT1AP50416 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CPT1AP50416 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.11□□□□□ -1.43
CPT1AP50416 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CPT1AP50416 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.11□□□□□ -1.43
CPT1AP50416 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CPT1AP50416 AC010132.2-201ENST00000295493 1043 ntBASIC6.11□□□□□ -1.43
CPT1AP50416 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CPT1AP50416 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CPT1AP50416 RNU1-106P-201ENST00000384382 164 ntBASIC6.11□□□□□ -1.43
CPT1AP50416 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
CPT1AP50416 RPL10P10-201ENST00000403509 664 ntBASIC6.11□□□□□ -1.43
CPT1AP50416 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.11□□□□□ -1.43
CPT1AP50416 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.11□□□□□ -1.43
CPT1AP50416 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.11□□□□□ -1.43
CPT1AP50416 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.11□□□□□ -1.43
CPT1AP50416 RNFT1P2-201ENST00000443064 757 ntBASIC6.11□□□□□ -1.43
CPT1AP50416 RPL32P14-201ENST00000463196 378 ntBASIC6.11□□□□□ -1.43
CPT1AP50416 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.11□□□□□ -1.43
CPT1AP50416 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.11□□□□□ -1.43
CPT1AP50416 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.11□□□□□ -1.43
CPT1AP50416 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.11□□□□□ -1.43
CPT1AP50416 RPL10P14-201ENST00000565265 298 ntBASIC6.11□□□□□ -1.43
CPT1AP50416 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.11□□□□□ -1.43
CPT1AP50416 AC005341.1-201ENST00000571086 708 ntBASIC6.11□□□□□ -1.43
CPT1AP50416 AC005021.1-201ENST00000608730 355 ntBASIC6.11□□□□□ -1.43
CPT1AP50416 AC112503.2-201ENST00000609005 552 ntBASIC6.11□□□□□ -1.43
CPT1AP50416 AL049539.1-201ENST00000611964 459 ntBASIC6.11□□□□□ -1.43
CPT1AP50416 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms