Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.1□□□□□ -1.59
SOX2P48431 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SOX2P48431 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.09□□□□□ -1.59
SOX2P48431 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.09□□□□□ -1.59
SOX2P48431 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SOX2P48431 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SOX2P48431 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.09□□□□□ -1.59
SOX2P48431 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SOX2P48431 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SOX2P48431 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SOX2P48431 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SOX2P48431 RN7SKP185-201ENST00000362813 326 ntBASIC5.09□□□□□ -1.59
SOX2P48431 RNU4-7P-201ENST00000364758 141 ntBASIC5.09□□□□□ -1.59
SOX2P48431 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.09□□□□□ -1.59
SOX2P48431 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX2P48431 MCTS2P-201ENST00000394552 546 ntBASIC5.09□□□□□ -1.59
SOX2P48431 PSMA6P1-201ENST00000400275 741 ntBASIC5.09□□□□□ -1.59
SOX2P48431 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX2P48431 AL139805.1-201ENST00000407837 289 ntBASIC5.09□□□□□ -1.59
SOX2P48431 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.09□□□□□ -1.59
SOX2P48431 RPS4XP5-201ENST00000419038 768 ntBASIC5.09□□□□□ -1.59
SOX2P48431 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX2P48431 GAPDHP19-201ENST00000431768 1005 ntBASIC5.09□□□□□ -1.59
SOX2P48431 FTLP19-201ENST00000433300 394 ntBASIC5.09□□□□□ -1.59
SOX2P48431 AL445928.1-201ENST00000435545 222 ntBASIC5.09□□□□□ -1.59
SOX2P48431 PA2G4P1-201ENST00000442248 1197 ntBASIC5.09□□□□□ -1.59
SOX2P48431 AC023141.8-201ENST00000442554 208 ntBASIC5.09□□□□□ -1.59
SOX2P48431 CYCSP51-201ENST00000443545 318 ntBASIC5.09□□□□□ -1.59
SOX2P48431 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX2P48431 SETD6P1-201ENST00000444575 317 ntBASIC5.09□□□□□ -1.59
SOX2P48431 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.09□□□□□ -1.59
SOX2P48431 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX2P48431 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX2P48431 AL122001.1-201ENST00000457027 370 ntBASIC5.09□□□□□ -1.59
SOX2P48431 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SOX2P48431 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.09□□□□□ -1.59
SOX2P48431 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SOX2P48431 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX2P48431 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
SOX2P48431 SNORA74.1-201ENST00000516320 180 ntBASIC5.09□□□□□ -1.59
SOX2P48431 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX2P48431 AC036111.2-201ENST00000533247 901 ntBASIC5.09□□□□□ -1.59
SOX2P48431 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SOX2P48431 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX2P48431 AC006518.2-201ENST00000542513 940 ntBASIC5.09□□□□□ -1.59
SOX2P48431 AC068305.2-201ENST00000550567 1205 ntBASIC5.09□□□□□ -1.59
SOX2P48431 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.09□□□□□ -1.59
SOX2P48431 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SOX2P48431 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX2P48431 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX2P48431 MRPS21P8-201ENST00000569196 235 ntBASIC5.09□□□□□ -1.59
SOX2P48431 RN7SL66P-201ENST00000582099 264 ntBASIC5.09□□□□□ -1.59
SOX2P48431 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.09□□□□□ -1.59
SOX2P48431 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.09□□□□□ -1.59
SOX2P48431 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SOX2P48431 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX2P48431 VN1R78P-201ENST00000597393 564 ntBASIC5.09□□□□□ -1.59
SOX2P48431 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.09□□□□□ -1.59
SOX2P48431 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.09□□□□□ -1.59
SOX2P48431 AC021171.1-201ENST00000603137 706 ntBASIC5.09□□□□□ -1.59
SOX2P48431 HIRAP1-201ENST00000605318 787 ntBASIC5.09□□□□□ -1.59
SOX2P48431 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.09□□□□□ -1.59
SOX2P48431 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.09□□□□□ -1.59
SOX2P48431 MIR6885-201ENST00000612241 66 ntBASIC5.09□□□□□ -1.59
SOX2P48431 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.09□□□□□ -1.59
SOX2P48431 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.09□□□□□ -1.59
SOX2P48431 AC026422.1-201ENST00000623961 452 ntBASIC5.09□□□□□ -1.59
SOX2P48431 AC011815.3-201ENST00000624194 473 ntBASIC5.09□□□□□ -1.59
SOX2P48431 AC005618.4-201ENST00000625053 554 ntBASIC5.09□□□□□ -1.59
SOX2P48431 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.09□□□□□ -1.59
SOX2P48431 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
SOX2P48431 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SOX2P48431 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX2P48431 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX2P48431 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 ZNF733P-202ENST00000444809 1573 ntBASIC5.08□□□□□ -1.6
SOX2P48431 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX2P48431 AC090181.3-201ENST00000624777 1514 ntBASIC5.08□□□□□ -1.6
SOX2P48431 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX2P48431 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX2P48431 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX2P48431 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX2P48431 VN2R3P-201ENST00000422626 1412 ntBASIC5.08□□□□□ -1.6
SOX2P48431 ADAM24P-201ENST00000398655 2101 ntBASIC5.08□□□□□ -1.6
SOX2P48431 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX2P48431 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SOX2P48431 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.08□□□□□ -1.6
SOX2P48431 SNORD116-2-201ENST00000384274 95 ntBASIC5.08□□□□□ -1.6
SOX2P48431 RNU6-1263P-201ENST00000384601 106 ntBASIC5.08□□□□□ -1.6
SOX2P48431 SNORD116-6-201ENST00000384711 96 ntBASIC5.08□□□□□ -1.6
SOX2P48431 SNORD65C-201ENST00000390962 71 ntBASIC5.08□□□□□ -1.6
SOX2P48431 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SOX2P48431 RPL23AP59-201ENST00000399415 461 ntBASIC5.08□□□□□ -1.6
SOX2P48431 AL136310.1-201ENST00000404926 654 ntBASIC5.08□□□□□ -1.6
SOX2P48431 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.08□□□□□ -1.6
SOX2P48431 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms