Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 BUD31P1-201ENST00000521828 359 ntBASIC6.27□□□□□ -1.41
TM4SF4P48230 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.27□□□□□ -1.41
TM4SF4P48230 AC139697.1-201ENST00000548429 745 ntBASIC6.27□□□□□ -1.41
TM4SF4P48230 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.27□□□□□ -1.41
TM4SF4P48230 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.27□□□□□ -1.41
TM4SF4P48230 AC005341.1-201ENST00000571086 708 ntBASIC6.27□□□□□ -1.41
TM4SF4P48230 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.27□□□□□ -1.41
TM4SF4P48230 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.27□□□□□ -1.41
TM4SF4P48230 MIR4270-201ENST00000581799 70 ntBASIC6.27□□□□□ -1.41
TM4SF4P48230 MIR4737-201ENST00000583979 81 ntBASIC6.27□□□□□ -1.41
TM4SF4P48230 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.27□□□□□ -1.41
TM4SF4P48230 AC125494.2-201ENST00000602431 657 ntBASIC6.27□□□□□ -1.41
TM4SF4P48230 AL391001.1-201ENST00000602747 715 ntBASIC6.27□□□□□ -1.41
TM4SF4P48230 AC079880.2-201ENST00000603790 1213 ntBASIC6.27□□□□□ -1.41
TM4SF4P48230 AC009597.2-201ENST00000604659 592 ntBASIC6.27□□□□□ -1.41
TM4SF4P48230 AC097504.2-201ENST00000608088 454 ntBASIC6.27□□□□□ -1.41
TM4SF4P48230 AC009704.2-201ENST00000618739 483 ntBASIC6.27□□□□□ -1.41
TM4SF4P48230 AC022306.3-201ENST00000619930 550 ntBASIC6.27□□□□□ -1.41
TM4SF4P48230 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.27□□□□□ -1.41
TM4SF4P48230 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF4P48230 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF4P48230 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF4P48230 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF4P48230 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
TM4SF4P48230 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
TM4SF4P48230 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.27□□□□□ -1.41
TM4SF4P48230 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF4P48230 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF4P48230 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF4P48230 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF4P48230 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TM4SF4P48230 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
TM4SF4P48230 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
TM4SF4P48230 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
TM4SF4P48230 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.26□□□□□ -1.41
TM4SF4P48230 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
TM4SF4P48230 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.26□□□□□ -1.41
TM4SF4P48230 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TM4SF4P48230 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 MIR137-201ENST00000385223 102 ntBASIC6.26□□□□□ -1.41
TM4SF4P48230 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TM4SF4P48230 AC104297.1-201ENST00000393779 870 ntBASIC6.26□□□□□ -1.41
TM4SF4P48230 AL035405.1-201ENST00000400795 710 ntBASIC6.26□□□□□ -1.41
TM4SF4P48230 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.26□□□□□ -1.41
TM4SF4P48230 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.26□□□□□ -1.41
TM4SF4P48230 AC013410.2-201ENST00000422627 201 ntBASIC6.26□□□□□ -1.41
TM4SF4P48230 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.26□□□□□ -1.41
TM4SF4P48230 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.26□□□□□ -1.41
TM4SF4P48230 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.26□□□□□ -1.41
TM4SF4P48230 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TM4SF4P48230 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.26□□□□□ -1.41
TM4SF4P48230 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 RPS7P6-201ENST00000485777 579 ntBASIC6.26□□□□□ -1.41
TM4SF4P48230 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.26□□□□□ -1.41
TM4SF4P48230 CAB39P1-201ENST00000502277 460 ntBASIC6.26□□□□□ -1.41
TM4SF4P48230 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.26□□□□□ -1.41
TM4SF4P48230 AC020937.1-201ENST00000519677 1013 ntBASIC6.26□□□□□ -1.41
TM4SF4P48230 AC078899.1-201ENST00000521432 1185 ntBASIC6.26□□□□□ -1.41
TM4SF4P48230 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 AP002373.2-201ENST00000541631 1060 ntBASIC6.26□□□□□ -1.41
TM4SF4P48230 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TM4SF4P48230 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.26□□□□□ -1.41
TM4SF4P48230 SS18L2P2-201ENST00000583960 235 ntBASIC6.26□□□□□ -1.41
TM4SF4P48230 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.26□□□□□ -1.41
TM4SF4P48230 AL513327.3-201ENST00000602618 469 ntBASIC6.26□□□□□ -1.41
TM4SF4P48230 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 MIR6780A-201ENST00000615089 68 ntBASIC6.26□□□□□ -1.41
TM4SF4P48230 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 AL450226.2-201ENST00000622913 439 ntBASIC6.26□□□□□ -1.41
TM4SF4P48230 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.26□□□□□ -1.41
TM4SF4P48230 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.26□□□□□ -1.41
TM4SF4P48230 RLIMP2-201ENST00000427891 1563 ntBASIC6.26□□□□□ -1.41
TM4SF4P48230 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.26□□□□□ -1.41
TM4SF4P48230 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TM4SF4P48230 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
TM4SF4P48230 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TM4SF4P48230 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.26□□□□□ -1.41
TM4SF4P48230 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
TM4SF4P48230 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF4P48230 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF4P48230 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF4P48230 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TM4SF4P48230 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF4P48230 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF4P48230 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF4P48230 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF4P48230 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF4P48230 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF4P48230 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF4P48230 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TM4SF4P48230 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms