Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH3P22223 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH3P22223 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH3P22223 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH3P22223 MIR6837-201ENST00000620884 64 ntBASIC5.32□□□□□ -1.56
CDH3P22223 AC073592.7-201ENST00000623659 507 ntBASIC5.32□□□□□ -1.56
CDH3P22223 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH3P22223 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH3P22223 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH3P22223 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH3P22223 ABCC13-202ENST00000463099 3842 ntBASIC5.32□□□□□ -1.56
CDH3P22223 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH3P22223 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CDH3P22223 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH3P22223 OR4F13P-202ENST00000560066 2054 ntBASIC5.32□□□□□ -1.56
CDH3P22223 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH3P22223 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 OR51C1P-202ENST00000641159 1444 ntBASIC5.31□□□□□ -1.56
CDH3P22223 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
CDH3P22223 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CDH3P22223 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CDH3P22223 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH3P22223 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDH3P22223 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 RNU1-77P-201ENST00000390868 162 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AL139039.2-201ENST00000407436 479 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AP000534.2-201ENST00000412729 568 ntBASIC5.31□□□□□ -1.56
CDH3P22223 GABARAPL3-201ENST00000412799 354 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH3P22223 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CDH3P22223 OR6C64P-201ENST00000419708 825 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AL355433.1-201ENST00000422804 300 ntBASIC5.31□□□□□ -1.56
CDH3P22223 OR10T1P-201ENST00000424327 947 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AC009784.1-201ENST00000426484 460 ntBASIC5.31□□□□□ -1.56
CDH3P22223 RAB9AP5-201ENST00000437794 597 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH3P22223 RAB9AP2-201ENST00000443911 597 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH3P22223 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH3P22223 RPL7P45-201ENST00000455851 743 ntBASIC5.31□□□□□ -1.56
CDH3P22223 HSPE1P22-201ENST00000456856 327 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AC110749.1-201ENST00000462007 357 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH3P22223 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH3P22223 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.31□□□□□ -1.56
CDH3P22223 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH3P22223 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH3P22223 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDH3P22223 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH3P22223 SETP1-201ENST00000556014 845 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH3P22223 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.31□□□□□ -1.56
CDH3P22223 FKBP1AP1-201ENST00000594588 318 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH3P22223 SUMO2P15-201ENST00000604285 278 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AP005131.7-201ENST00000610087 611 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AL139407.1-201ENST00000613826 1175 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AL359513.1-201ENST00000614364 557 ntBASIC5.31□□□□□ -1.56
CDH3P22223 AC020763.5-201ENST00000623298 430 ntBASIC5.31□□□□□ -1.56
CDH3P22223 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.31□□□□□ -1.56
CDH3P22223 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CDH3P22223 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH3P22223 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 AC104964.3-201ENST00000606115 2860 ntBASIC5.31□□□□□ -1.56
CDH3P22223 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.31□□□□□ -1.56
CDH3P22223 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.31□□□□□ -1.56
CDH3P22223 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDH3P22223 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDH3P22223 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH3P22223 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CDH3P22223 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.3□□□□□ -1.56
CDH3P22223 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH3P22223 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.3□□□□□ -1.56
CDH3P22223 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.3□□□□□ -1.56
CDH3P22223 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDH3P22223 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH3P22223 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.3□□□□□ -1.56
CDH3P22223 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH3P22223 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH3P22223 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CDH3P22223 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDH3P22223 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH3P22223 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDH3P22223 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDH3P22223 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CDH3P22223 AC211486.3-201ENST00000412694 621 ntBASIC5.3□□□□□ -1.56
CDH3P22223 AL392003.1-201ENST00000434394 243 ntBASIC5.3□□□□□ -1.56
CDH3P22223 CYCSP12-201ENST00000437729 300 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms