Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
TOP2AP11388 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC8.55□□□□□ -1.04
TOP2AP11388 RPL36AP41-201ENST00000493820 306 ntBASIC8.55□□□□□ -1.04
TOP2AP11388 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC8.55□□□□□ -1.04
TOP2AP11388 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC8.55□□□□□ -1.04
TOP2AP11388 UQCRC2P1-201ENST00000417777 1332 ntBASIC8.55□□□□□ -1.04
TOP2AP11388 SMG1P7-201ENST00000565246 2704 ntBASIC8.55□□□□□ -1.04
TOP2AP11388 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
TOP2AP11388 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC8.55□□□□□ -1.04
TOP2AP11388 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TOP2AP11388 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TOP2AP11388 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TOP2AP11388 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
TOP2AP11388 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
TOP2AP11388 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TOP2AP11388 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
TOP2AP11388 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
TOP2AP11388 OR1L6-202ENST00000373684 1044 ntBASIC8.54□□□□□ -1.04
TOP2AP11388 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC8.54□□□□□ -1.04
TOP2AP11388 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC8.54□□□□□ -1.04
TOP2AP11388 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC8.54□□□□□ -1.04
TOP2AP11388 MTND2P40-201ENST00000436718 841 ntBASIC8.54□□□□□ -1.04
TOP2AP11388 ARL2BPP10-201ENST00000446487 531 ntBASIC8.54□□□□□ -1.04
TOP2AP11388 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC8.54□□□□□ -1.04
TOP2AP11388 AC091868.1-201ENST00000508746 304 ntBASIC8.54□□□□□ -1.04
TOP2AP11388 AC026688.1-201ENST00000520639 1168 ntBASIC8.54□□□□□ -1.04
TOP2AP11388 PARP1P2-201ENST00000556806 195 ntBASIC8.54□□□□□ -1.04
TOP2AP11388 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC8.54□□□□□ -1.04
TOP2AP11388 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC8.54□□□□□ -1.04
TOP2AP11388 AC040958.1-201ENST00000561102 201 ntBASIC8.54□□□□□ -1.04
TOP2AP11388 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC8.54□□□□□ -1.04
TOP2AP11388 AC018695.5-201ENST00000605872 315 ntBASIC8.54□□□□□ -1.04
TOP2AP11388 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC8.54□□□□□ -1.04
TOP2AP11388 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TOP2AP11388 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC8.54□□□□□ -1.04
TOP2AP11388 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC8.54□□□□□ -1.04
TOP2AP11388 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.54□□□□□ -1.04
TOP2AP11388 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.54□□□□□ -1.04
TOP2AP11388 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
TOP2AP11388 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC8.54□□□□□ -1.04
TOP2AP11388 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC8.54□□□□□ -1.04
TOP2AP11388 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC8.54□□□□□ -1.04
TOP2AP11388 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.54□□□□□ -1.04
TOP2AP11388 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TOP2AP11388 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC8.54□□□□□ -1.04
TOP2AP11388 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TOP2AP11388 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
TOP2AP11388 RPL12P9-201ENST00000412942 488 ntBASIC8.54□□□□□ -1.04
TOP2AP11388 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC8.54□□□□□ -1.04
TOP2AP11388 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TOP2AP11388 AC079168.2-201ENST00000453977 416 ntBASIC8.54□□□□□ -1.04
TOP2AP11388 ATP5A1P7-201ENST00000453978 1279 ntBASIC8.54□□□□□ -1.04
TOP2AP11388 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC8.54□□□□□ -1.04
TOP2AP11388 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC8.54□□□□□ -1.04
TOP2AP11388 AC138701.1-201ENST00000524329 714 ntBASIC8.54□□□□□ -1.04
TOP2AP11388 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC8.54□□□□□ -1.04
TOP2AP11388 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC8.54□□□□□ -1.04
TOP2AP11388 AC005191.1-201ENST00000603950 358 ntBASIC8.54□□□□□ -1.04
TOP2AP11388 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC8.54□□□□□ -1.04
TOP2AP11388 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TOP2AP11388 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TOP2AP11388 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC8.54□□□□□ -1.04
TOP2AP11388 AC093671.1-201ENST00000624981 2929 ntBASIC8.54□□□□□ -1.04
TOP2AP11388 AC068446.1-201ENST00000556425 1549 ntBASIC8.53□□□□□ -1.04
TOP2AP11388 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC8.53□□□□□ -1.04
TOP2AP11388 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TOP2AP11388 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
TOP2AP11388 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.53□□□□□ -1.04
TOP2AP11388 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TOP2AP11388 AC108463.1-201ENST00000450258 347 ntBASIC8.53□□□□□ -1.04
TOP2AP11388 RN7SL41P-201ENST00000476144 297 ntBASIC8.53□□□□□ -1.04
TOP2AP11388 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC8.53□□□□□ -1.04
TOP2AP11388 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TOP2AP11388 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC8.53□□□□□ -1.04
TOP2AP11388 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC8.53□□□□□ -1.04
TOP2AP11388 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC8.53□□□□□ -1.04
TOP2AP11388 AC068733.2-201ENST00000605434 1418 ntBASIC8.53□□□□□ -1.04
TOP2AP11388 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TOP2AP11388 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC8.53□□□□□ -1.04
TOP2AP11388 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC8.53□□□□□ -1.04
TOP2AP11388 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
TOP2AP11388 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
TOP2AP11388 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TOP2AP11388 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TOP2AP11388 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.52□□□□□ -1.05
TOP2AP11388 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TOP2AP11388 MTCO1P15-201ENST00000529569 1526 ntBASIC8.52□□□□□ -1.05
TOP2AP11388 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TOP2AP11388 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC8.52□□□□□ -1.05
TOP2AP11388 AC009643.2-201ENST00000603543 1448 ntBASIC8.52□□□□□ -1.05
TOP2AP11388 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TOP2AP11388 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TOP2AP11388 RNA5SP515-201ENST00000364570 118 ntBASIC8.52□□□□□ -1.05
TOP2AP11388 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC8.52□□□□□ -1.05
TOP2AP11388 AC073052.1-201ENST00000440417 714 ntBASIC8.52□□□□□ -1.05
TOP2AP11388 PRPF38AP1-201ENST00000451976 933 ntBASIC8.52□□□□□ -1.05
TOP2AP11388 AC109327.1-201ENST00000471666 403 ntBASIC8.52□□□□□ -1.05
TOP2AP11388 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC8.52□□□□□ -1.05
TOP2AP11388 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC8.52□□□□□ -1.05
TOP2AP11388 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms