Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 THAP12P4-201ENST00000528321 2266 ntBASIC5.39□□□□□ -1.55
RETP07949 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RETP07949 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
RETP07949 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RETP07949 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RETP07949 OR4F13P-202ENST00000560066 2054 ntBASIC5.38□□□□□ -1.55
RETP07949 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RETP07949 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.38□□□□□ -1.55
RETP07949 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RETP07949 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.38□□□□□ -1.55
RETP07949 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.38□□□□□ -1.55
RETP07949 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RETP07949 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RETP07949 AC092681.1-201ENST00000297369 291 ntBASIC5.38□□□□□ -1.55
RETP07949 AL121886.1-201ENST00000358609 435 ntBASIC5.38□□□□□ -1.55
RETP07949 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RETP07949 RN7SKP149-201ENST00000363008 344 ntBASIC5.38□□□□□ -1.55
RETP07949 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RETP07949 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RETP07949 AL133482.1-201ENST00000415988 498 ntBASIC5.38□□□□□ -1.55
RETP07949 RPL7P56-201ENST00000429441 717 ntBASIC5.38□□□□□ -1.55
RETP07949 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.38□□□□□ -1.55
RETP07949 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.38□□□□□ -1.55
RETP07949 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.38□□□□□ -1.55
RETP07949 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.38□□□□□ -1.55
RETP07949 AL672138.1-201ENST00000450604 1015 ntBASIC5.38□□□□□ -1.55
RETP07949 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.38□□□□□ -1.55
RETP07949 AL356981.1-201ENST00000454879 684 ntBASIC5.38□□□□□ -1.55
RETP07949 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.38□□□□□ -1.55
RETP07949 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.38□□□□□ -1.55
RETP07949 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.38□□□□□ -1.55
RETP07949 MTND6P2-201ENST00000512226 524 ntBASIC5.38□□□□□ -1.55
RETP07949 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.38□□□□□ -1.55
RETP07949 TOMM20P2-201ENST00000540082 421 ntBASIC5.38□□□□□ -1.55
RETP07949 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.38□□□□□ -1.55
RETP07949 DPRXP4-201ENST00000578053 568 ntBASIC5.38□□□□□ -1.55
RETP07949 SS18L2P2-201ENST00000583960 235 ntBASIC5.38□□□□□ -1.55
RETP07949 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.38□□□□□ -1.55
RETP07949 AC093799.2-201ENST00000610062 578 ntBASIC5.38□□□□□ -1.55
RETP07949 AC015660.5-201ENST00000623238 564 ntBASIC5.38□□□□□ -1.55
RETP07949 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
RETP07949 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RETP07949 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RETP07949 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RETP07949 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RETP07949 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RETP07949 AC002525.1-201ENST00000624392 1622 ntBASIC5.37□□□□□ -1.55
RETP07949 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RETP07949 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RETP07949 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RETP07949 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RETP07949 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.37□□□□□ -1.55
RETP07949 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RETP07949 AL353625.1-202ENST00000366273 571 ntBASIC5.37□□□□□ -1.55
RETP07949 RNA5SP187-201ENST00000384400 119 ntBASIC5.37□□□□□ -1.55
RETP07949 RPS16P5-201ENST00000406501 404 ntBASIC5.37□□□□□ -1.55
RETP07949 AC096921.1-201ENST00000411661 375 ntBASIC5.37□□□□□ -1.55
RETP07949 NPM1P40-201ENST00000412758 733 ntBASIC5.37□□□□□ -1.55
RETP07949 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.37□□□□□ -1.55
RETP07949 DNAJC19P7-201ENST00000428811 344 ntBASIC5.37□□□□□ -1.55
RETP07949 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
RETP07949 AC016712.1-201ENST00000431088 378 ntBASIC5.37□□□□□ -1.55
RETP07949 Z92846.1-201ENST00000456203 268 ntBASIC5.37□□□□□ -1.55
RETP07949 AC007537.2-201ENST00000472093 511 ntBASIC5.37□□□□□ -1.55
RETP07949 AC096741.1-201ENST00000472250 846 ntBASIC5.37□□□□□ -1.55
RETP07949 STRADBP1-201ENST00000478954 1281 ntBASIC5.37□□□□□ -1.55
RETP07949 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.37□□□□□ -1.55
RETP07949 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.37□□□□□ -1.55
RETP07949 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.37□□□□□ -1.55
RETP07949 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.37□□□□□ -1.55
RETP07949 C1GALT1P3-201ENST00000522049 819 ntBASIC5.37□□□□□ -1.55
RETP07949 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.37□□□□□ -1.55
RETP07949 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RETP07949 AC008147.3-201ENST00000548666 354 ntBASIC5.37□□□□□ -1.55
RETP07949 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RETP07949 DHFRP1-201ENST00000579682 559 ntBASIC5.37□□□□□ -1.55
RETP07949 MIR7853-201ENST00000584820 132 ntBASIC5.37□□□□□ -1.55
RETP07949 AC010503.3-201ENST00000594355 540 ntBASIC5.37□□□□□ -1.55
RETP07949 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.37□□□□□ -1.55
RETP07949 AL133406.3-201ENST00000606817 541 ntBASIC5.37□□□□□ -1.55
RETP07949 AC010632.3-201ENST00000611377 369 ntBASIC5.37□□□□□ -1.55
RETP07949 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RETP07949 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RETP07949 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.37□□□□□ -1.55
RETP07949 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.37□□□□□ -1.55
RETP07949 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.37□□□□□ -1.55
RETP07949 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RETP07949 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
RETP07949 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.37□□□□□ -1.55
RETP07949 AC011503.2-201ENST00000594230 1500 ntBASIC5.37□□□□□ -1.55
RETP07949 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RETP07949 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.37□□□□□ -1.55
RETP07949 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RETP07949 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RETP07949 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.37□□□□□ -1.55
RETP07949 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RETP07949 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RETP07949 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RETP07949 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RETP07949 RNU4-44P-201ENST00000363050 141 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms