Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC006499.4-201ENST00000510947 694 ntBASIC4.36□□□□□ -1.71
HLA-DQB1P01920 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DQB1P01920 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DQB1P01920 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HLA-DQB1P01920 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DQB1P01920 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.36□□□□□ -1.71
HLA-DQB1P01920 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.36□□□□□ -1.71
HLA-DQB1P01920 AC079315.1-201ENST00000602952 623 ntBASIC4.36□□□□□ -1.71
HLA-DQB1P01920 AP005432.2-201ENST00000608162 586 ntBASIC4.36□□□□□ -1.71
HLA-DQB1P01920 AP005131.7-201ENST00000610087 611 ntBASIC4.36□□□□□ -1.71
HLA-DQB1P01920 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.36□□□□□ -1.71
HLA-DQB1P01920 CU639417.4-201ENST00000623928 207 ntBASIC4.36□□□□□ -1.71
HLA-DQB1P01920 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.36□□□□□ -1.71
HLA-DQB1P01920 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
HLA-DQB1P01920 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DQB1P01920 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.36□□□□□ -1.71
HLA-DQB1P01920 SCARNA15-201ENST00000607520 4325 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AL672167.1-205ENST00000641112 3080 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 U3.35-201ENST00000408405 208 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AL160275.2-201ENST00000412010 394 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 VDAC1P9-201ENST00000412766 841 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AL356968.2-201ENST00000412769 1257 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 PDSS1P1-201ENST00000422953 1114 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AC005033.1-201ENST00000428904 813 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 PPIAP13-201ENST00000434706 478 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 EEF1B2P6-201ENST00000445713 673 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AC090589.1-201ENST00000473109 362 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AC020779.1-201ENST00000478757 796 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 RN7SL170P-201ENST00000487098 295 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AC104971.1-201ENST00000495117 578 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AC138866.2-201ENST00000508650 584 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AL138895.2-201ENST00000603019 178 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 ECM1P2-201ENST00000503354 1577 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 AL138820.1-201ENST00000617901 5305 ntBASIC4.35□□□□□ -1.71
HLA-DQB1P01920 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
HLA-DQB1P01920 EOGT-210ENST00000615922 1931 ntBASIC4.34□□□□□ -1.71
HLA-DQB1P01920 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 AC023490.2-201ENST00000359859 470 ntBASIC4.34□□□□□ -1.71
HLA-DQB1P01920 MIR133B-201ENST00000362210 119 ntBASIC4.34□□□□□ -1.71
HLA-DQB1P01920 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 RNA5SP122-201ENST00000384457 108 ntBASIC4.34□□□□□ -1.71
HLA-DQB1P01920 GABARAPL3-201ENST00000412799 354 ntBASIC4.34□□□□□ -1.71
HLA-DQB1P01920 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 QRSL1P2-201ENST00000418582 964 ntBASIC4.34□□□□□ -1.71
HLA-DQB1P01920 GTF2IP2-201ENST00000424290 697 ntBASIC4.34□□□□□ -1.71
HLA-DQB1P01920 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 TDGF1P1-201ENST00000445734 527 ntBASIC4.34□□□□□ -1.71
HLA-DQB1P01920 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 YRDCP3-201ENST00000456507 480 ntBASIC4.34□□□□□ -1.71
HLA-DQB1P01920 RN7SL517P-201ENST00000462240 305 ntBASIC4.34□□□□□ -1.71
HLA-DQB1P01920 SIAH1P1-201ENST00000479411 923 ntBASIC4.34□□□□□ -1.71
HLA-DQB1P01920 RPS4XP18-201ENST00000495480 763 ntBASIC4.34□□□□□ -1.71
HLA-DQB1P01920 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB1P01920 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms