Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN9O95484 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.98□□□□□ -1.61
CLDN9O95484 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CLDN9O95484 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN9O95484 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN9O95484 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN9O95484 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN9O95484 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN9O95484 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
CLDN9O95484 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN9O95484 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN9O95484 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN9O95484 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN9O95484 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLDN9O95484 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN9O95484 AL672167.2-201ENST00000377164 879 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 MIR600-201ENST00000385007 98 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN9O95484 MIR1182-201ENST00000408363 97 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 OR3A2-201ENST00000408891 1076 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 RN7SKP16-201ENST00000410180 299 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN9O95484 EI24P4-201ENST00000423683 1078 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 AL121776.1-201ENST00000429337 372 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN9O95484 LYPLA1P1-201ENST00000434514 622 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 AC004980.3-201ENST00000447046 365 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN9O95484 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN9O95484 RPL7P39-201ENST00000481157 744 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 AC005412.2-201ENST00000492004 341 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN9O95484 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN9O95484 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN9O95484 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN9O95484 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.97□□□□□ -1.61
CLDN9O95484 AL049779.2-201ENST00000553847 315 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN9O95484 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.97□□□□□ -1.61
CLDN9O95484 ADAM3B-201ENST00000569937 840 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 MIR4489-201ENST00000578869 62 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 AP002884.5-201ENST00000595053 1132 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN9O95484 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN9O95484 AL159169.2-201ENST00000610061 1269 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 BX005214.3-202ENST00000619809 325 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 AC087821.1-201ENST00000623639 567 ntBASIC4.97□□□□□ -1.61
CLDN9O95484 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN9O95484 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN9O95484 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN9O95484 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN9O95484 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CLDN9O95484 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CLDN9O95484 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN9O95484 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.97□□□□□ -1.61
CLDN9O95484 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLDN9O95484 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CLDN9O95484 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.97□□□□□ -1.61
CLDN9O95484 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.96□□□□□ -1.61
CLDN9O95484 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CLDN9O95484 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.96□□□□□ -1.61
CLDN9O95484 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN9O95484 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.96□□□□□ -1.62
CLDN9O95484 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CLDN9O95484 SMG1P4-204ENST00000523028 4131 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLDN9O95484 RNA5SP183-201ENST00000362452 119 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 RN7SKP113-201ENST00000363891 295 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 RN7SKP59-201ENST00000410520 314 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN9O95484 AC096644.3-201ENST00000416788 338 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 AL121878.1-201ENST00000418638 859 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 PTP4A1P1-201ENST00000420539 515 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 AC104333.2-201ENST00000422630 192 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 AC108075.1-201ENST00000424692 529 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 AL139148.1-201ENST00000427122 680 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 FTLP19-201ENST00000433300 394 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN9O95484 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN9O95484 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN9O95484 SEPT7P3-201ENST00000455017 621 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN9O95484 SIAH1P1-201ENST00000479411 923 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN9O95484 AC134349.2-201ENST00000535136 910 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN9O95484 AC127381.1-201ENST00000555979 939 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 NDUFB4P11-201ENST00000560510 395 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN9O95484 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN9O95484 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.96□□□□□ -1.62
CLDN9O95484 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN9O95484 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.96□□□□□ -1.62
CLDN9O95484 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN9O95484 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN9O95484 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.96□□□□□ -1.62
CLDN9O95484 AC090527.3-201ENST00000619041 548 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 AC138965.3-201ENST00000623875 498 ntBASIC4.96□□□□□ -1.62
CLDN9O95484 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.96□□□□□ -1.62
CLDN9O95484 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms