Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC28A1O00337 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SLC28A1O00337 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC28A1O00337 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC28A1O00337 PCAT14-202ENST00000627127 3935 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC28A1O00337 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SLC28A1O00337 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC28A1O00337 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.04□□□□□ -1.6
SLC28A1O00337 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC28A1O00337 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC28A1O00337 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.04□□□□□ -1.6
SLC28A1O00337 AC083799.1-201ENST00000366451 910 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 MIR621-201ENST00000384919 96 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SLC28A1O00337 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC28A1O00337 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC28A1O00337 IPPKP1-201ENST00000422501 768 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 AC093084.1-201ENST00000424233 687 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 YY1P1-201ENST00000427625 668 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 AC009238.2-201ENST00000431026 355 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 AL390119.1-201ENST00000440329 312 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC28A1O00337 AC073909.1-201ENST00000447112 999 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 AL157884.3-201ENST00000448273 1184 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC28A1O00337 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.04□□□□□ -1.6
SLC28A1O00337 EIF1P7-201ENST00000487533 337 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 RN7SL447P-201ENST00000494711 245 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC28A1O00337 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC28A1O00337 OR4V1P-201ENST00000525394 1140 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC28A1O00337 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC28A1O00337 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.04□□□□□ -1.6
SLC28A1O00337 AC114947.2-201ENST00000565748 2125 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC28A1O00337 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SLC28A1O00337 RBM22P1-201ENST00000578589 1214 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC28A1O00337 AC008814.1-201ENST00000603797 406 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC28A1O00337 WBP1LP8-201ENST00000617401 327 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 AC074140.1-201ENST00000621617 208 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 AP000648.2-201ENST00000624182 404 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC28A1O00337 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC28A1O00337 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC28A1O00337 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SLC28A1O00337 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC28A1O00337 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC28A1O00337 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC28A1O00337 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC28A1O00337 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SLC28A1O00337 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC28A1O00337 AC004817.4-201ENST00000602396 3625 ntBASIC5.04□□□□□ -1.6
SLC28A1O00337 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SLC28A1O00337 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC28A1O00337 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC28A1O00337 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC28A1O00337 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC28A1O00337 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC28A1O00337 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
SLC28A1O00337 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC28A1O00337 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC28A1O00337 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC28A1O00337 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC28A1O00337 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC28A1O00337 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SLC28A1O00337 RNA5SP335-201ENST00000363817 110 ntBASIC5.03□□□□□ -1.6
SLC28A1O00337 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC28A1O00337 AC104297.1-201ENST00000393779 870 ntBASIC5.03□□□□□ -1.6
SLC28A1O00337 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC28A1O00337 MTCYBP7-201ENST00000419540 1134 ntBASIC5.03□□□□□ -1.6
SLC28A1O00337 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC28A1O00337 AC104333.2-201ENST00000422630 192 ntBASIC5.03□□□□□ -1.6
SLC28A1O00337 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC28A1O00337 AL606490.8-201ENST00000441624 319 ntBASIC5.03□□□□□ -1.6
SLC28A1O00337 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC28A1O00337 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC28A1O00337 RANP1-206ENST00000455094 651 ntBASIC5.03□□□□□ -1.6
SLC28A1O00337 AC108161.1-201ENST00000461060 402 ntBASIC5.03□□□□□ -1.6
SLC28A1O00337 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC28A1O00337 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC28A1O00337 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC28A1O00337 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC28A1O00337 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.03□□□□□ -1.6
SLC28A1O00337 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SLC28A1O00337 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC28A1O00337 AC018695.5-201ENST00000605872 315 ntBASIC5.03□□□□□ -1.6
SLC28A1O00337 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC28A1O00337 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC28A1O00337 AC100814.1-201ENST00000606963 623 ntBASIC5.03□□□□□ -1.6
SLC28A1O00337 AC118658.2-201ENST00000618697 459 ntBASIC5.03□□□□□ -1.6
SLC28A1O00337 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.03□□□□□ -1.6
SLC28A1O00337 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC28A1O00337 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC28A1O00337 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC28A1O00337 SAMMSON-227ENST00000642114 1199 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms