Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FTLP8-201ENST00000446770 267 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AP006222.1-205ENST00000450734 457 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 NAP1L1P3-201ENST00000462291 880 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC073610.1-201ENST00000489971 396 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC023050.1-201ENST00000498198 304 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC244502.2-201ENST00000543361 851 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC090236.2-201ENST00000587933 1101 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 BNIP3P24-201ENST00000593398 557 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC025588.2-201ENST00000604851 466 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC231759.1-201ENST00000616455 597 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC123767.1-202ENST00000620407 817 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AP002782.1-201ENST00000623107 614 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 AC034229.2-201ENST00000566945 2508 ntBASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDHB1Q9Y5F3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PCDHB1Q9Y5F3 AL137141.1-201ENST00000624622 4836 ntBASIC5.96□□□□□ -1.45
PCDHB1Q9Y5F3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PCDHB1Q9Y5F3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
PCDHB1Q9Y5F3 RBMY1HP-201ENST00000382759 1389 ntBASIC5.96□□□□□ -1.45
PCDHB1Q9Y5F3 MTND4P8-201ENST00000514997 1362 ntBASIC5.96□□□□□ -1.45
PCDHB1Q9Y5F3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 RNA5SP27-201ENST00000363839 119 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 RNU6-1263P-201ENST00000384601 106 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC245096.1-201ENST00000413104 546 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 HMGB3P31-201ENST00000413333 595 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 HMGB1P49-201ENST00000418882 569 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 MTCO3P4-201ENST00000419236 787 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 NME1P1-201ENST00000420914 382 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 NMD3P2-201ENST00000421815 761 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC010099.3-201ENST00000423896 409 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 BX323845.3-201ENST00000428215 527 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC084290.1-201ENST00000434995 374 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 Z83846.1-201ENST00000446798 265 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC005077.1-201ENST00000449226 375 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 OR51B8P-201ENST00000449892 769 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 ACA64.4-201ENST00000459070 127 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 HIGD1AP18-201ENST00000520730 278 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC007346.2-201ENST00000564816 892 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC145350.1-201ENST00000567426 208 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AP005119.1-201ENST00000580956 292 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC084782.3-201ENST00000612282 578 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 OR8G7P-201ENST00000616658 848 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC096708.4-201ENST00000620563 552 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AC079416.3-201ENST00000624479 549 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 AF287957.1-201ENST00000607368 1595 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 GNL2P1-201ENST00000451274 2190 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 UGT2B26P-201ENST00000508672 1613 ntBASIC5.96□□□□□ -1.46
PCDHB1Q9Y5F3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PCDHB1Q9Y5F3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 280.9 ms