Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 SCARNA18.2-201ENST00000516882 84 ntBASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 KCTD9P4-201ENST00000526766 1166 ntBASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 HNRNPA1P71-201ENST00000559135 950 ntBASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 AP001004.1-201ENST00000582468 324 ntBASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 RPL12P25-202ENST00000598100 674 ntBASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 AC008638.3-201ENST00000603341 463 ntBASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 AC015982.1-201ENST00000608113 465 ntBASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 AC092807.2-201ENST00000609367 243 ntBASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 TPTEP1-208ENST00000636884 213 ntBASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HPS5Q9UPZ3 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 MFSD8-218ENST00000641186 4448 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 SNORD35A-201ENST00000363389 86 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 Y_RNA.193-201ENST00000363979 102 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 RNU6-639P-201ENST00000384074 107 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 RPS3AP36-201ENST00000398190 775 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 RN7SKP106-201ENST00000410832 272 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AC211486.3-201ENST00000412694 621 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AL139184.1-202ENST00000422303 222 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 RPS27AP14-201ENST00000422868 454 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 OFD1P12Y-201ENST00000427963 1207 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AL358934.1-201ENST00000432346 324 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 SNRPEP4-201ENST00000435815 279 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AC092601.1-201ENST00000444526 383 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AC079193.1-201ENST00000460497 588 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 RN7SL392P-201ENST00000473024 299 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 MTND1P3-201ENST00000484956 952 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 RN7SL283P-201ENST00000489055 303 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 NACAP6-201ENST00000509572 622 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 RNU6-1170P-201ENST00000515974 106 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 CA1-215ENST00000522389 551 ntTSL 3 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AP003122.4-201ENST00000530980 758 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AC023442.1-201ENST00000531247 422 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AC009955.2-201ENST00000597288 542 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AL137000.1-201ENST00000610528 1244 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AC108479.2-201ENST00000617314 601 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 EEF1A1P14-201ENST00000421195 1376 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 MTND5P33-201ENST00000571250 1450 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
HPS5Q9UPZ3 AC109315.1-201ENST00000584143 1347 ntBASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 UGT2B25P-201ENST00000511504 1586 ntBASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 STAG3L4-201ENST00000352103 530 ntBASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 Y_RNA.1-201ENST00000352915 104 ntBASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 RNA5SP88-201ENST00000365560 109 ntBASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
HPS5Q9UPZ3 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms