Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC009852.2-201ENST00000567898 485 ntBASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 AC012146.2-201ENST00000576545 416 ntBASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 MIR4310-201ENST00000582950 57 ntBASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 AL512329.2-201ENST00000607350 548 ntBASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 RNU6-84P-201ENST00000607737 102 ntBASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 AC099494.2-201ENST00000623371 978 ntBASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.84□□□□□ -1.63
VPS29Q9UBQ0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AC083843.2-201ENST00000568248 6253 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AC013442.1-201ENST00000397347 228 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AL389925.1-201ENST00000432257 728 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 BX323845.1-201ENST00000432417 179 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AL450023.3-201ENST00000440592 271 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 KNOP1P3-201ENST00000446933 426 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AL157385.1-201ENST00000446973 268 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 BTF3P6-201ENST00000448054 499 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AL606490.1-201ENST00000452266 765 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 HMGB1P4-201ENST00000455362 567 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 ATP5LP3-201ENST00000514223 304 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AC126915.2-201ENST00000610957 190 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AC008115.4-201ENST00000619780 775 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AP002505.2-201ENST00000623585 696 ntBASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VPS29Q9UBQ0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 BRAFP1-201ENST00000445336 2703 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 MIR1286-201ENST00000408112 78 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 SNORA77-201ENST00000408716 125 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 CTSL3P-202ENST00000412179 788 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 CBX1P3-201ENST00000413296 527 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 OR5M12P-201ENST00000423388 929 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 RPS29P9-201ENST00000440360 171 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 AC245047.2-201ENST00000441060 530 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 AL354714.3-201ENST00000447284 493 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 AL356981.1-201ENST00000454879 684 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 RN7SKP260-201ENST00000516907 149 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 AC021733.2-201ENST00000518830 497 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 EIF4A2P5-201ENST00000529914 499 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 AP002373.2-201ENST00000541631 1060 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VPS29Q9UBQ0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms