Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.9□□□□□ -1.46
DKK3Q9UBP4 AC132825.7-201ENST00000638744 335 ntBASIC5.9□□□□□ -1.46
DKK3Q9UBP4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 OR10AB1P-202ENST00000641219 1686 ntBASIC5.9□□□□□ -1.47
DKK3Q9UBP4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 OR9K1P-202ENST00000641111 3217 ntBASIC5.9□□□□□ -1.47
DKK3Q9UBP4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 NEPNP-201ENST00000404786 1371 ntBASIC5.9□□□□□ -1.47
DKK3Q9UBP4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 AC079753.1-201ENST00000623243 3868 ntBASIC5.9□□□□□ -1.47
DKK3Q9UBP4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.9□□□□□ -1.47
DKK3Q9UBP4 AC005005.4-201ENST00000623789 16698 ntBASIC5.9□□□□□ -1.47
DKK3Q9UBP4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 SNORD1C-201ENST00000363315 78 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 RNY3P9-201ENST00000384727 106 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 HMGB3P19-201ENST00000403971 560 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 AC023141.8-201ENST00000442554 208 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 AC245517.2-201ENST00000442890 346 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 RBMY2TP-201ENST00000451162 947 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 RN7SL188P-201ENST00000469842 285 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 MRPS36P5-201ENST00000551909 298 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 AC007346.2-201ENST00000564816 892 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 DHFRP1-201ENST00000579682 559 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 AC124283.4-201ENST00000581815 456 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 MIR4260-201ENST00000583107 67 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 AP001267.4-201ENST00000602598 545 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 AL606834.3-201ENST00000602615 496 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 BCORP1-203ENST00000513194 5093 ntBASIC5.89□□□□□ -1.47
DKK3Q9UBP4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
DKK3Q9UBP4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AL355488.2-201ENST00000609909 2850 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AL672167.2-201ENST00000377164 879 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 RPL22P22-201ENST00000395439 379 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 ZNF602P-201ENST00000405929 924 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AL355615.1-201ENST00000406187 641 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AC096533.1-201ENST00000411645 353 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 SETP15-201ENST00000412724 337 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 MRPL53P1-201ENST00000414323 319 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 BX664727.1-201ENST00000416024 466 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AL365220.1-201ENST00000432923 399 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.88□□□□□ -1.47
DKK3Q9UBP4 RAB9AP5-201ENST00000437794 597 ntBASIC5.88□□□□□ -1.47
DKK3Q9UBP4 AC006994.1-201ENST00000438212 839 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms