Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU1-24P-201ENST00000364285 165 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 MRPS6P2-201ENST00000381143 370 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC093084.1-201ENST00000424233 687 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 RPL7P44-201ENST00000424827 742 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 SNRPEP8-201ENST00000442866 260 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC245291.3-201ENST00000443400 292 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 COX6CP12-201ENST00000446748 202 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC098818.1-201ENST00000478593 252 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 GAPDHP39-201ENST00000481866 979 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 RN7SL413P-201ENST00000482700 297 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC116917.1-201ENST00000520558 305 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC083923.1-201ENST00000523708 376 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC092375.1-201ENST00000550410 637 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 NIFKP8-201ENST00000560500 874 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC009063.1-201ENST00000563342 702 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 SNORD39.2-201ENST00000579995 76 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AL390816.3-201ENST00000604527 1066 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AL513218.1-201ENST00000606527 391 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC005962.2-201ENST00000611427 652 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 OR1N1-202ENST00000619659 939 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 AL354718.1-201ENST00000619764 589 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC018692.2-201ENST00000624130 348 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC127070.3-201ENST00000503695 3263 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC119674.1-204ENST00000641348 1343 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CNTN3Q9P232 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 MTND4P23-201ENST00000447723 1363 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 AC112243.1-201ENST00000623949 3851 ntBASIC7.18□□□□□ -1.26
CNTN3Q9P232 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.18□□□□□ -1.26
CNTN3Q9P232 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CNTN3Q9P232 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CNTN3Q9P232 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 AL034403.1-201ENST00000399414 885 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 RNU6-575P-201ENST00000411326 105 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 RANP6-201ENST00000413691 644 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 NPM1P4-201ENST00000414095 812 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 RPL7AP51-201ENST00000422016 760 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 AC011742.2-201ENST00000443818 352 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 CALM1P2-201ENST00000452941 448 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 AC239798.3-201ENST00000454459 408 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 SULT1D1P-201ENST00000458020 882 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 PNPLA4P1-201ENST00000458328 305 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 ACTG1P13-201ENST00000486987 1043 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 AL117692.1-201ENST00000494283 713 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 AC093664.1-201ENST00000511779 289 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 RN7SKP298-201ENST00000515950 94 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 SCARNA5-201ENST00000516201 276 ntBASIC7.17□□□□□ -1.26
CNTN3Q9P232 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.17□□□□□ -1.26
CNTN3Q9P232 AC087808.1-201ENST00000520501 361 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms