Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 AC138907.8-201ENST00000623981 2256 ntBASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
TRIM54Q9BYV2 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AL355578.1-201ENST00000607405 1328 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AL034546.1-201ENST00000623740 3693 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 PROS2P-201ENST00000474651 1951 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 RN7SKP171-201ENST00000364417 303 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 RNU6-532P-201ENST00000384318 107 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 HMGB3P31-201ENST00000413333 595 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 MTND4P3-201ENST00000417829 541 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 GTF2IP3-201ENST00000433887 494 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 PNKDP1-201ENST00000435914 430 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AL035407.2-201ENST00000454090 378 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC008837.1-201ENST00000511513 412 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC112673.1-201ENST00000513168 575 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 RN7SKP183-201ENST00000517169 324 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 WBP1LP3-201ENST00000523033 208 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC104417.1-201ENST00000523974 751 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 OR8Q1P-201ENST00000526467 655 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 NDUFS5P6-201ENST00000529136 295 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC090424.1-201ENST00000535243 736 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC087897.1-201ENST00000550134 156 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 OR11H3P-201ENST00000554547 982 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 NDUFA5P11-201ENST00000567995 343 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 OR1E3-201ENST00000575608 948 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AP005119.1-201ENST00000580956 292 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC005377.1-201ENST00000605126 456 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AP001437.1-201ENST00000608783 456 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC079395.3-201ENST00000615161 484 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC011472.4-201ENST00000615848 491 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AL121890.3-201ENST00000618494 516 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AL591926.1-201ENST00000620542 217 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AL683826.1-201ENST00000624104 627 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 PARP4P2-201ENST00000446672 3326 ntBASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
TRIM54Q9BYV2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
TRIM54Q9BYV2 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM54Q9BYV2 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM54Q9BYV2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM54Q9BYV2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM54Q9BYV2 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM54Q9BYV2 CASC19-260ENST00000641828 2001 ntBASIC5.76□□□□□ -1.49
TRIM54Q9BYV2 NLRP3P1-201ENST00000622303 1785 ntBASIC5.76□□□□□ -1.49
TRIM54Q9BYV2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM54Q9BYV2 COX6B1P3-201ENST00000312310 260 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms