Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC074029.4-201ENST00000624796 1859 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 UGT2B28-201ENST00000335568 1833 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC013488.1-201ENST00000526618 1838 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 ZNF285B-201ENST00000561698 1767 ntBASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC2.54□□□□□ -2
KRTAP4-3Q9BYR4 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC025574.1-201ENST00000554784 1653 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 Z99129.4-201ENST00000624649 2435 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AL031595.3-201ENST00000624919 14262 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC012618.3-205ENST00000637896 1496 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 FTX-215ENST00000638681 9771 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SAMMSON-222ENST00000641901 2727 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AL606490.2-201ENST00000457562 1330 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 EEF1A1P42-201ENST00000613436 1331 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 NACA3P-201ENST00000359690 648 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-28P-201ENST00000362378 107 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RN7SKP36-201ENST00000363997 312 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SNORD73B-201ENST00000364394 72 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-1303P-201ENST00000364841 107 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SNORD15A-201ENST00000384214 148 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 Y_RNA.478-201ENST00000384358 107 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RN7SKP117-201ENST00000410175 264 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RNU6-564P-201ENST00000410983 104 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AL139135.1-201ENST00000412675 209 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SEPT7P8-201ENST00000413308 775 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC109780.2-201ENST00000413467 845 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 MTCO2P5-201ENST00000422621 426 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC130360.1-201ENST00000425489 1117 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 SUMO2P8-201ENST00000434672 286 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 YWHAZP8-201ENST00000436935 731 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RPL7P29-201ENST00000437151 728 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 HMGB1P18-201ENST00000438801 619 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AL592114.2-201ENST00000440142 532 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC087499.3-202ENST00000441215 1173 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RPL21P89-201ENST00000444021 467 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 COX6CP12-201ENST00000446748 202 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC104058.1-201ENST00000448028 297 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 OR1H1P-201ENST00000448731 937 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AL031736.1-201ENST00000449688 618 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 MRPS31P2-201ENST00000451581 518 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 CHIAP1-201ENST00000456220 995 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 MED28P7-201ENST00000456611 530 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RN7SL233P-201ENST00000469988 277 ntBASIC2.53□□□□□ -2
KRTAP4-3Q9BYR4 RPS3AP14-201ENST00000483907 780 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms