Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 IGBP1P5-201ENST00000507524 1000 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC095057.1-201ENST00000507583 168 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 HMGB3P13-201ENST00000511263 607 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC106800.2-201ENST00000514009 1103 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC138517.1-201ENST00000515724 568 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 RNU6-507P-201ENST00000516045 100 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 RNU6-314P-201ENST00000516574 104 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 OR5AL2P-201ENST00000532185 920 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC009063.1-201ENST00000563342 702 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 PPIAP14-201ENST00000577627 496 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 MTCO3P13-201ENST00000577757 781 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 BNIP3P26-201ENST00000600827 554 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC091304.9-201ENST00000612091 226 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC006338.1-201ENST00000618453 749 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 DUXAP9-208ENST00000622815 614 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC061999.1-201ENST00000624454 177 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC005034.3-201ENST00000604845 1747 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 AC007012.2-201ENST00000623206 1676 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 HSPD1P9-201ENST00000420325 1636 ntBASIC5.56□□□□□ -1.52
SSBP3Q9BWW4 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC119674.1-204ENST00000641348 1343 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC078880.4-201ENST00000617627 1749 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC112243.1-201ENST00000623949 3851 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 RNA5SP140-201ENST00000364524 92 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 MIR181A1-201ENST00000385026 110 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 SNORD115-47-201ENST00000391226 86 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AL391422.1-201ENST00000402155 436 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 RN7SKP296-201ENST00000411185 341 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AL356968.2-201ENST00000412769 1257 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 RPL21P108-201ENST00000413857 481 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 BTF3P9-201ENST00000418784 283 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 Z97055.1-201ENST00000419730 712 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 PAICSP7-201ENST00000419829 962 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC000111.3-201ENST00000433478 193 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AL662791.1-201ENST00000441992 928 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC245291.3-201ENST00000443400 292 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 MTATP6P30-201ENST00000443540 664 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC099670.1-201ENST00000455141 783 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 DNAJC19P1-201ENST00000455312 319 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC147055.4-201ENST00000504399 745 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC092349.1-201ENST00000504903 310 ntBASIC5.55□□□□□ -1.52
SSBP3Q9BWW4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms