Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 WNK1-220ENST00000574564 1401 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 RNU6-379P-201ENST00000363813 104 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 FANK1-201ENST00000368689 522 ntTSL 3 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AL356432.2-201ENST00000407841 422 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 MIR548F5-201ENST00000408421 86 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 HMGN1P34-201ENST00000413023 290 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AL160004.2-201ENST00000432935 350 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 RPL21P88-201ENST00000436649 436 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 TXNP1-201ENST00000441872 371 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 MTCO3P10-201ENST00000455912 772 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 RNU7-27P-201ENST00000459281 62 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 GMFBP1-201ENST00000467831 427 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC006512.1-201ENST00000468816 291 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 RN7SL792P-201ENST00000496286 305 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC107222.1-201ENST00000510899 637 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 RNU6-410P-201ENST00000517006 107 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AP006587.2-201ENST00000530696 493 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 AP000889.2-201ENST00000532684 490 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC073913.2-201ENST00000541512 145 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC104046.1-201ENST00000559487 406 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AC073534.1-201ENST00000598671 1056 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 FMO10P-201ENST00000455032 1493 ntBASIC7.29□□□□□ -1.24
USB1Q9BQ65 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 USP44-208ENST00000552440 1818 ntTSL 5 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 LCLAT1-201ENST00000309052 5060 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USB1Q9BQ65 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 GC-208ENST00000513476 1567 ntTSL 5 BASIC7.29□□□□□ -1.24
USB1Q9BQ65 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 AL096816.1-201ENST00000623300 2920 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 RNA5SP256-201ENST00000390978 113 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 MRPL42P3-201ENST00000401492 326 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 RNA5SP265-201ENST00000411023 111 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 HMGB3P2-201ENST00000411913 584 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 METTL15P3-201ENST00000415522 1221 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 AL731534.1-201ENST00000434711 269 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 AL445686.1-201ENST00000443086 348 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 AC002366.1-201ENST00000446186 1190 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
USB1Q9BQ65 DBIL5P-202ENST00000453414 250 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 AL162395.1-201ENST00000457882 422 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 RN7SL856P-201ENST00000461754 298 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 RPS15AP17-201ENST00000470598 390 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 RPL31P50-201ENST00000471002 296 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 RPL21P99-201ENST00000480369 423 ntBASIC7.28□□□□□ -1.24
USB1Q9BQ65 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
USB1Q9BQ65 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms