Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SSX3Q99909 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SSX3Q99909 SMG1P6-201ENST00000532337 2930 ntBASIC4.76□□□□□ -1.65
SSX3Q99909 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSX3Q99909 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SSX3Q99909 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSX3Q99909 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.75□□□□□ -1.65
SSX3Q99909 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.75□□□□□ -1.65
SSX3Q99909 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSX3Q99909 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSX3Q99909 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.75□□□□□ -1.65
SSX3Q99909 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.75□□□□□ -1.65
SSX3Q99909 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SSX3Q99909 AP001642.1-201ENST00000624727 2117 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 DDX6P1-205ENST00000441966 1436 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.75□□□□□ -1.65
SSX3Q99909 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SSX3Q99909 RNU1-150P-201ENST00000362491 162 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 MIR323B-201ENST00000385269 82 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 MIR320B1-201ENST00000390209 79 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SSX3Q99909 SNORA17A-201ENST00000391185 133 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.75□□□□□ -1.65
SSX3Q99909 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.75□□□□□ -1.65
SSX3Q99909 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.75□□□□□ -1.65
SSX3Q99909 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.75□□□□□ -1.65
SSX3Q99909 RPS26P13-201ENST00000419030 330 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 MTND4LP14-201ENST00000429447 288 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.75□□□□□ -1.65
SSX3Q99909 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.75□□□□□ -1.65
SSX3Q99909 RPL7L1P1-201ENST00000448259 785 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.75□□□□□ -1.65
SSX3Q99909 AL162739.1-201ENST00000450606 307 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 AC089999.1-201ENST00000460336 374 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.75□□□□□ -1.65
SSX3Q99909 OR7E157P-201ENST00000494376 911 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.75□□□□□ -1.65
SSX3Q99909 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.75□□□□□ -1.65
SSX3Q99909 RNU6-1308P-201ENST00000516817 103 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 SNORA70.20-201ENST00000516848 126 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 IGKV3D-34-201ENST00000522638 302 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.75□□□□□ -1.65
SSX3Q99909 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSX3Q99909 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.75□□□□□ -1.65
SSX3Q99909 AC018552.3-201ENST00000567416 561 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.75□□□□□ -1.65
SSX3Q99909 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.75□□□□□ -1.65
SSX3Q99909 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSX3Q99909 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSX3Q99909 AP004372.1-201ENST00000604842 844 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 AC007786.3-201ENST00000615154 596 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.75□□□□□ -1.65
SSX3Q99909 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 AP003497.2-201ENST00000624220 967 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 HPVC1-201ENST00000629899 1198 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 SNORA17.5-201ENST00000630429 132 ntBASIC4.75□□□□□ -1.65
SSX3Q99909 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.75□□□□□ -1.65
SSX3Q99909 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSX3Q99909 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSX3Q99909 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSX3Q99909 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SSX3Q99909 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SSX3Q99909 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SSX3Q99909 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC4.75□□□□□ -1.65
SSX3Q99909 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
SSX3Q99909 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
SSX3Q99909 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.74□□□□□ -1.65
SSX3Q99909 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX3Q99909 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSX3Q99909 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX3Q99909 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX3Q99909 AC090017.1-201ENST00000548612 1779 ntBASIC4.74□□□□□ -1.65
SSX3Q99909 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.74□□□□□ -1.65
SSX3Q99909 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SSX3Q99909 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX3Q99909 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SSX3Q99909 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SSX3Q99909 RNU6-244P-201ENST00000391028 104 ntBASIC4.74□□□□□ -1.65
SSX3Q99909 RNA5SP178-201ENST00000410380 128 ntBASIC4.74□□□□□ -1.65
SSX3Q99909 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.74□□□□□ -1.65
SSX3Q99909 MTATP6P19-201ENST00000413797 659 ntBASIC4.74□□□□□ -1.65
SSX3Q99909 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.74□□□□□ -1.65
SSX3Q99909 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.74□□□□□ -1.65
SSX3Q99909 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.74□□□□□ -1.65
SSX3Q99909 BX119321.1-201ENST00000428912 797 ntBASIC4.74□□□□□ -1.65
SSX3Q99909 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSX3Q99909 DEFA9P-201ENST00000433042 285 ntBASIC4.74□□□□□ -1.65
SSX3Q99909 ZFAND6P1-201ENST00000434138 605 ntBASIC4.74□□□□□ -1.65
SSX3Q99909 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX3Q99909 AC023141.8-201ENST00000442554 208 ntBASIC4.74□□□□□ -1.65
SSX3Q99909 AL161636.2-201ENST00000445179 927 ntBASIC4.74□□□□□ -1.65
SSX3Q99909 RPL36AP39-201ENST00000445859 318 ntBASIC4.74□□□□□ -1.65
SSX3Q99909 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.74□□□□□ -1.65
SSX3Q99909 AC012512.1-201ENST00000446594 718 ntBASIC4.74□□□□□ -1.65
SSX3Q99909 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.74□□□□□ -1.65
SSX3Q99909 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SSX3Q99909 PPIAP20-201ENST00000449839 135 ntBASIC4.74□□□□□ -1.65
SSX3Q99909 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.74□□□□□ -1.65
SSX3Q99909 RNA5SP103-201ENST00000459503 118 ntBASIC4.74□□□□□ -1.65
SSX3Q99909 APOOP2-201ENST00000461561 539 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms