Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 CASC19-221ENST00000641309 1382 ntBASIC5.16□□□□□ -1.58
ECHDC3Q96DC8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ECHDC3Q96DC8 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
ECHDC3Q96DC8 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.15□□□□□ -1.58
ECHDC3Q96DC8 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.15□□□□□ -1.58
ECHDC3Q96DC8 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.15□□□□□ -1.58
ECHDC3Q96DC8 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
ECHDC3Q96DC8 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.15□□□□□ -1.58
ECHDC3Q96DC8 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ECHDC3Q96DC8 AC004158.1-201ENST00000564508 4319 ntBASIC5.15□□□□□ -1.58
ECHDC3Q96DC8 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
ECHDC3Q96DC8 AL603750.1-201ENST00000624216 1717 ntBASIC5.15□□□□□ -1.58
ECHDC3Q96DC8 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ECHDC3Q96DC8 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ECHDC3Q96DC8 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AL078599.1-201ENST00000402075 293 ntBASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 BRWD1P3-201ENST00000428816 390 ntBASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 RN7SL329P-201ENST00000467740 299 ntBASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AC004453.1-201ENST00000487895 408 ntBASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AC051619.2-201ENST00000559063 397 ntBASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 BNIP3P35-201ENST00000604530 490 ntBASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AC016252.1-201ENST00000609721 474 ntBASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AC108359.1-201ENST00000616451 1211 ntBASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AL122125.1-201ENST00000616999 600 ntBASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
ECHDC3Q96DC8 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 HSPA8P14-201ENST00000552265 1805 ntBASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 RN7SKP113-201ENST00000363891 295 ntBASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 RPL12P9-201ENST00000412942 488 ntBASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 BX323845.1-201ENST00000432417 179 ntBASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 NDUFA5P8-201ENST00000449019 346 ntBASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 AC004980.4-201ENST00000513375 203 ntBASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 RN7SKP66-201ENST00000516681 231 ntBASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 RN7SKP260-201ENST00000516907 149 ntBASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 AC040958.1-201ENST00000561102 201 ntBASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 AC093799.2-201ENST00000610062 578 ntBASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 AC026367.3-201ENST00000619032 590 ntBASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 CR383656.5-201ENST00000547616 1340 ntBASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 SMG1P7-201ENST00000565246 2704 ntBASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
ECHDC3Q96DC8 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
ECHDC3Q96DC8 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms