Protein–RNA interactions for Protein: Q96B26

EXOSC8, Exosome complex component RRP43, humanhuman

Known RBP Predictions only

Length 276 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8Q96B26 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 AP000864.1-201ENST00000609424 650 ntBASIC4.86□□□□□ -1.63
EXOSC8Q96B26 AP005131.7-201ENST00000610087 611 ntBASIC4.86□□□□□ -1.63
EXOSC8Q96B26 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.86□□□□□ -1.63
EXOSC8Q96B26 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 BRAFP1-201ENST00000445336 2703 ntBASIC4.86□□□□□ -1.63
EXOSC8Q96B26 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 AC073136.1-201ENST00000449426 2884 ntBASIC4.86□□□□□ -1.63
EXOSC8Q96B26 AC008079.2-201ENST00000623543 20396 ntBASIC4.86□□□□□ -1.63
EXOSC8Q96B26 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
EXOSC8Q96B26 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 AP000542.2-201ENST00000623199 6179 ntBASIC4.85□□□□□ -1.63
EXOSC8Q96B26 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 U3.2-201ENST00000362981 210 ntBASIC4.85□□□□□ -1.63
EXOSC8Q96B26 RNU4-44P-201ENST00000363050 141 ntBASIC4.85□□□□□ -1.63
EXOSC8Q96B26 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 RN7SKP206-201ENST00000410823 293 ntBASIC4.85□□□□□ -1.63
EXOSC8Q96B26 NPM1P40-201ENST00000412758 733 ntBASIC4.85□□□□□ -1.63
EXOSC8Q96B26 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 AL591623.2-201ENST00000449978 222 ntBASIC4.85□□□□□ -1.63
EXOSC8Q96B26 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 ATP5LP3-201ENST00000514223 304 ntBASIC4.85□□□□□ -1.63
EXOSC8Q96B26 RNU6-964P-201ENST00000516524 69 ntBASIC4.85□□□□□ -1.63
EXOSC8Q96B26 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 AC024940.3-201ENST00000538551 316 ntBASIC4.85□□□□□ -1.63
EXOSC8Q96B26 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 IMMP1LP3-201ENST00000604197 224 ntBASIC4.85□□□□□ -1.63
EXOSC8Q96B26 AC090527.3-201ENST00000619041 548 ntBASIC4.85□□□□□ -1.63
EXOSC8Q96B26 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 MIR4302-201ENST00000638058 60 ntBASIC4.85□□□□□ -1.63
EXOSC8Q96B26 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.85□□□□□ -1.63
EXOSC8Q96B26 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 NR1H5P-201ENST00000452683 1377 ntBASIC4.84□□□□□ -1.63
EXOSC8Q96B26 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 DUTP5-201ENST00000406790 469 ntBASIC4.84□□□□□ -1.63
EXOSC8Q96B26 MIR1182-201ENST00000408363 97 ntBASIC4.84□□□□□ -1.63
EXOSC8Q96B26 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 RN7SKP16-201ENST00000410180 299 ntBASIC4.84□□□□□ -1.63
EXOSC8Q96B26 RN7SKP126-201ENST00000411143 300 ntBASIC4.84□□□□□ -1.63
EXOSC8Q96B26 SLC35E1P1-201ENST00000419313 864 ntBASIC4.84□□□□□ -1.63
EXOSC8Q96B26 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.84□□□□□ -1.63
EXOSC8Q96B26 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 AL606490.1-201ENST00000452266 765 ntBASIC4.84□□□□□ -1.63
EXOSC8Q96B26 RN7SL443P-201ENST00000464331 290 ntBASIC4.84□□□□□ -1.63
EXOSC8Q96B26 AC021660.1-201ENST00000465006 554 ntBASIC4.84□□□□□ -1.63
EXOSC8Q96B26 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 AC024558.1-201ENST00000505008 528 ntBASIC4.84□□□□□ -1.63
EXOSC8Q96B26 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 AC108359.1-201ENST00000616451 1211 ntBASIC4.84□□□□□ -1.63
EXOSC8Q96B26 AC008115.4-201ENST00000619780 775 ntBASIC4.84□□□□□ -1.63
EXOSC8Q96B26 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
EXOSC8Q96B26 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms