Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AC006115.2-201ENST00000596823 202 ntBASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AC105148.1-201ENST00000604961 409 ntBASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AL158050.2-201ENST00000605336 568 ntBASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AC100847.1-201ENST00000611316 481 ntBASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AC123768.4-201ENST00000616244 701 ntBASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AC099654.15-201ENST00000639802 509 ntBASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AC092162.3-201ENST00000624511 1624 ntBASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AL359955.1-201ENST00000455242 3275 ntBASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AC046144.1-201ENST00000478559 1853 ntBASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AC025470.1-201ENST00000510053 2032 ntBASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS37AQ8NEZ2 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VPS37AQ8NEZ2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 RNA5SP77-201ENST00000365394 120 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 RSL24D1P1-201ENST00000404972 493 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AC096533.1-201ENST00000411645 353 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AL096829.1-201ENST00000413677 457 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 OR13Z1P-201ENST00000416141 834 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 YWHAEP5-201ENST00000431545 765 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 PSMD10P2-201ENST00000432890 672 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 ACTR3P2-201ENST00000439585 1257 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AL356121.1-201ENST00000442911 156 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 GAPDHP14-201ENST00000450472 937 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AC016027.4-201ENST00000450866 277 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 RPL23AP71-201ENST00000470966 469 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AL035404.1-201ENST00000497982 568 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 TOMM22P4-201ENST00000511318 336 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 RNA5SP434-201ENST00000516647 121 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 COX6B1P6-201ENST00000522347 255 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AC127381.1-201ENST00000555979 939 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AC011891.2-201ENST00000604949 397 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AL355816.1-201ENST00000607951 118 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AC093388.1-201ENST00000609166 430 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AC093673.2-201ENST00000609674 331 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AC096861.1-201ENST00000616652 240 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AC022079.2-201ENST00000619739 566 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AC116563.2-201ENST00000624751 535 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 SNX18P12-201ENST00000624821 759 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 IFIT1P1-201ENST00000400497 1449 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 AC090971.4-201ENST00000560291 1800 ntBASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VPS37AQ8NEZ2 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS37AQ8NEZ2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS37AQ8NEZ2 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VPS37AQ8NEZ2 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VPS37AQ8NEZ2 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS37AQ8NEZ2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.7□□□□□ -1.5
VPS37AQ8NEZ2 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VPS37AQ8NEZ2 LINC01613-201ENST00000561476 2780 ntBASIC5.7□□□□□ -1.5
VPS37AQ8NEZ2 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VPS37AQ8NEZ2 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.7□□□□□ -1.5
VPS37AQ8NEZ2 RN7SKP184-201ENST00000362348 333 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms