Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC117394.1-201ENST00000477323 567 ntBASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 RNA5SP362-201ENST00000516048 118 ntBASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 AL049779.2-201ENST00000553847 315 ntBASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 AC011445.2-201ENST00000599274 173 ntBASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 CASC19-264ENST00000641912 1184 ntBASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 SCN1A-220ENST00000641603 12506 ntBASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
TTC9CQ8N5M4 MAPK10-286ENST00000641208 8747 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 U3.3-201ENST00000362986 216 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 RNA5SP435-201ENST00000364044 108 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 RN7SKP59-201ENST00000410520 314 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 Z92846.1-201ENST00000456203 268 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 OR2AO1P-201ENST00000476497 403 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 GTF2F2P1-201ENST00000511083 675 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 AC100784.1-201ENST00000522790 310 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 AC006349.1-201ENST00000555526 235 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 AP005131.7-201ENST00000610087 611 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 AC074140.1-201ENST00000621617 208 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 AC136428.4-201ENST00000634254 1155 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 CYP4F35P-202ENST00000636121 390 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 AP000542.2-201ENST00000623199 6179 ntBASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TTC9CQ8N5M4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 Z95327.2-201ENST00000414579 1873 ntBASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 AL512422.1-201ENST00000407033 553 ntBASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 SLC35E1P1-201ENST00000419313 864 ntBASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 CHEK2P5-201ENST00000423877 246 ntBASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 RPS4XP16-201ENST00000427198 791 ntBASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 GAPDHP34-201ENST00000432112 823 ntBASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 AL391987.1-201ENST00000441025 200 ntBASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 CYCSP24-201ENST00000445119 316 ntBASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 AC015864.1-201ENST00000496512 544 ntBASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 MYL12BP2-201ENST00000503948 512 ntBASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 IGKV2-18-201ENST00000522607 343 ntBASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 AC022882.1-201ENST00000532142 501 ntBASIC4.09□□□□□ -1.75
TTC9CQ8N5M4 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms