Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AC087477.6-201ENST00000559595 843 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 SULT1C2P1-202ENST00000562418 459 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AC017100.2-201ENST00000584628 355 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 YTHDF2P1-201ENST00000604759 1271 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AC113361.1-201ENST00000606683 543 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 MIR1302-2-201ENST00000607096 138 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AL451049.1-201ENST00000608672 497 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AL442067.2-201ENST00000614033 363 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AC015712.7-201ENST00000615211 635 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AP006248.2-201ENST00000623309 592 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 LINC01125-248ENST00000627284 700 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 TMCC1P1-201ENST00000518897 1980 ntBASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.09□□□□□ -1.27
DEPDC4Q8N2C3 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
DEPDC4Q8N2C3 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
DEPDC4Q8N2C3 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
DEPDC4Q8N2C3 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 RLIMP2-201ENST00000427891 1563 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 OR9K1P-201ENST00000326513 941 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 RNU6-1322P-201ENST00000364309 107 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AL080285.1-201ENST00000404225 984 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 RNU6-195P-201ENST00000411352 109 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 BTF3L4P3-201ENST00000418879 476 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 RAC1P4-201ENST00000419413 579 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AF228730.4-201ENST00000421457 183 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 RPL4P4-201ENST00000422486 1284 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC104837.2-201ENST00000427236 424 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC022022.1-201ENST00000430304 178 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 SDCBPP1-201ENST00000440192 890 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 HMGN3P1-201ENST00000453847 193 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 RPL36AP51-201ENST00000487216 318 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 RPSAP52-201ENST00000489520 1144 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 RPL39P36-201ENST00000490784 156 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC090424.1-201ENST00000535243 736 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC107954.1-201ENST00000565906 727 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 TUBAP4-201ENST00000569261 416 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC009171.1-201ENST00000572673 266 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 MIR3714-201ENST00000579507 65 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 MIR4258-201ENST00000580920 91 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 RNU6-87P-201ENST00000607561 108 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC093788.1-201ENST00000609356 927 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC074029.3-201ENST00000618623 312 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC090574.1-201ENST00000623186 233 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 SAMMSON-222ENST00000641901 2727 ntBASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
DEPDC4Q8N2C3 AC025574.1-201ENST00000554784 1653 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms