Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GABPAQ06546 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
GABPAQ06546 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.96□□□□□ -1.46
GABPAQ06546 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GABPAQ06546 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.96□□□□□ -1.46
GABPAQ06546 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.96□□□□□ -1.46
GABPAQ06546 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GABPAQ06546 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
GABPAQ06546 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GABPAQ06546 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
GABPAQ06546 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GABPAQ06546 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
GABPAQ06546 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GABPAQ06546 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GABPAQ06546 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GABPAQ06546 RNA5SP223-201ENST00000365174 120 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.95□□□□□ -1.46
GABPAQ06546 RNU11-201ENST00000387069 134 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 AL035419.1-201ENST00000397037 564 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GABPAQ06546 AL390316.1-201ENST00000406279 553 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 RPL37P18-201ENST00000411602 243 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
GABPAQ06546 RPA2P2-201ENST00000419698 796 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.95□□□□□ -1.46
GABPAQ06546 AC008072.1-201ENST00000434254 824 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
GABPAQ06546 AL137845.2-201ENST00000444292 988 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 AC112498.1-201ENST00000444401 332 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 GAPDHP56-201ENST00000506031 988 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.95□□□□□ -1.46
GABPAQ06546 AL512310.9-201ENST00000553311 948 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 EDDM3DP-201ENST00000554692 434 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.95□□□□□ -1.46
GABPAQ06546 BGLT3-201ENST00000564523 994 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.95□□□□□ -1.46
GABPAQ06546 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.95□□□□□ -1.46
GABPAQ06546 AL360012.1-201ENST00000602813 131 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 AL136295.6-201ENST00000610486 658 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.95□□□□□ -1.46
GABPAQ06546 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.95□□□□□ -1.46
GABPAQ06546 AC132825.8-201ENST00000640783 297 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.95□□□□□ -1.46
GABPAQ06546 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
GABPAQ06546 AC093297.3-201ENST00000607056 2517 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 SAMMSON-210ENST00000641260 1308 ntBASIC5.95□□□□□ -1.46
GABPAQ06546 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GABPAQ06546 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GABPAQ06546 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.95□□□□□ -1.46
GABPAQ06546 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
GABPAQ06546 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GABPAQ06546 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
GABPAQ06546 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.94□□□□□ -1.46
GABPAQ06546 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.94□□□□□ -1.46
GABPAQ06546 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
GABPAQ06546 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GABPAQ06546 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GABPAQ06546 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GABPAQ06546 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
GABPAQ06546 Z97832.1-201ENST00000402490 328 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.94□□□□□ -1.46
GABPAQ06546 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.94□□□□□ -1.46
GABPAQ06546 AF186996.5-201ENST00000418098 904 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.94□□□□□ -1.46
GABPAQ06546 AC093414.1-201ENST00000434712 514 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 RPL7AP61-201ENST00000443410 636 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.94□□□□□ -1.46
GABPAQ06546 RN7SL319P-201ENST00000480656 221 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 RN7SL441P-201ENST00000492388 296 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 RPSAP51-201ENST00000497462 645 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.94□□□□□ -1.46
GABPAQ06546 AL671862.1-201ENST00000515851 349 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 AC012339.2-201ENST00000523996 453 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.94□□□□□ -1.46
GABPAQ06546 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.94□□□□□ -1.46
GABPAQ06546 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.94□□□□□ -1.46
GABPAQ06546 AC022884.2-201ENST00000578535 580 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 AC011453.2-201ENST00000603737 729 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 AL031320.1-201ENST00000604177 357 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 AC015849.6-201ENST00000605454 474 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 AL354950.1-201ENST00000614150 568 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.94□□□□□ -1.46
GABPAQ06546 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GABPAQ06546 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.94□□□□□ -1.46
GABPAQ06546 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GABPAQ06546 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GABPAQ06546 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.94□□□□□ -1.46
GABPAQ06546 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.94□□□□□ -1.46
GABPAQ06546 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.93□□□□□ -1.46
GABPAQ06546 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GABPAQ06546 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GABPAQ06546 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
GABPAQ06546 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
GABPAQ06546 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.93□□□□□ -1.46
GABPAQ06546 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
GABPAQ06546 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GABPAQ06546 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.93□□□□□ -1.46
GABPAQ06546 HMGB3P7-201ENST00000400214 611 ntBASIC5.93□□□□□ -1.46
GABPAQ06546 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms