Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
HMGCS1Q01581 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
HMGCS1Q01581 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
HMGCS1Q01581 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
HMGCS1Q01581 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HMGCS1Q01581 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.62
HMGCS1Q01581 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCS1Q01581 MIR1286-201ENST00000408112 78 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGCS1Q01581 AC013429.2-201ENST00000418798 781 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 AC108075.1-201ENST00000424692 529 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 COX6CP13-201ENST00000428703 226 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 RPL12P18-201ENST00000437175 325 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGCS1Q01581 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGCS1Q01581 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCS1Q01581 AL606490.1-201ENST00000452266 765 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 RPS26P39-201ENST00000469206 341 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 COPS8P2-201ENST00000473228 627 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 AC024558.1-201ENST00000505008 528 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 PGAM1P13-201ENST00000507497 754 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.9□□□□□ -1.63
HMGCS1Q01581 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.9□□□□□ -1.63
HMGCS1Q01581 AC011840.5-201ENST00000582125 771 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 AP000894.4-201ENST00000610185 483 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 RPSAP73-201ENST00000614820 330 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.9□□□□□ -1.63
HMGCS1Q01581 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HMGCS1Q01581 SCARNA15-201ENST00000607520 4325 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCS1Q01581 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGCS1Q01581 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCS1Q01581 THAP12P5-201ENST00000405864 2275 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 CIR1P2-201ENST00000514821 1342 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCS1Q01581 AC011447.7-201ENST00000624228 1590 ntBASIC4.9□□□□□ -1.63
HMGCS1Q01581 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
HMGCS1Q01581 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.9□□□□□ -1.63
HMGCS1Q01581 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HMGCS1Q01581 AC003985.2-201ENST00000562268 1669 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS1Q01581 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGCS1Q01581 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS1Q01581 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS1Q01581 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGCS1Q01581 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HMGCS1Q01581 MTHFD2P5-201ENST00000320415 844 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 AC017079.1-201ENST00000333650 415 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 U3.2-201ENST00000362981 210 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 NUDT19P3-201ENST00000404698 555 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGCS1Q01581 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS1Q01581 AC007738.1-201ENST00000413892 348 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 SLC35E1P1-201ENST00000419313 864 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS1Q01581 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGCS1Q01581 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGCS1Q01581 RN7SL443P-201ENST00000464331 290 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 UBA52P7-201ENST00000486088 380 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGCS1Q01581 MORF4L2P1-201ENST00000503761 858 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 SNORA70.11-201ENST00000515987 138 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 SNORA70.13-201ENST00000516116 138 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 AC105031.1-201ENST00000518550 476 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 AP006245.2-201ENST00000522004 300 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGCS1Q01581 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.89□□□□□ -1.63
HMGCS1Q01581 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGCS1Q01581 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGCS1Q01581 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.89□□□□□ -1.63
HMGCS1Q01581 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGCS1Q01581 AL512329.2-201ENST00000607350 548 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 AL512624.1-201ENST00000613638 469 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 AC090527.3-201ENST00000619041 548 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 AC008115.4-201ENST00000619780 775 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 SMG1P4-204ENST00000523028 4131 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 AC010266.2-201ENST00000564741 3255 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS1Q01581 MRRFP1-201ENST00000435941 1675 ntBASIC4.89□□□□□ -1.63
HMGCS1Q01581 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS1Q01581 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS1Q01581 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 AC083843.2-201ENST00000568248 6253 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 AC013442.1-201ENST00000397347 228 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 GTF3AP1-201ENST00000416942 1004 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 BX323845.1-201ENST00000432417 179 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 RPL35AP21-201ENST00000437667 333 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 AL157385.1-201ENST00000446973 268 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 MRPL35P2-201ENST00000448009 511 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 AC009127.1-201ENST00000467090 155 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 RPS21P4-201ENST00000487122 248 ntBASIC4.88□□□□□ -1.63
HMGCS1Q01581 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
HMGCS1Q01581 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms