Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.63□□□□□ -1.67
H3F3AP84243 SETP1-201ENST00000556014 845 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.63□□□□□ -1.67
H3F3AP84243 AP005432.2-201ENST00000608162 586 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.63□□□□□ -1.67
H3F3AP84243 AP000894.4-201ENST00000610185 483 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 AC091932.2-201ENST00000623014 291 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.63□□□□□ -1.67
H3F3AP84243 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
H3F3AP84243 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.63□□□□□ -1.67
H3F3AP84243 NEAT1-202ENST00000501122 22743 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 SMG1P7-201ENST00000565246 2704 ntBASIC4.63□□□□□ -1.67
H3F3AP84243 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.63□□□□□ -1.67
H3F3AP84243 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
H3F3AP84243 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
H3F3AP84243 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
H3F3AP84243 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
H3F3AP84243 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.63□□□□□ -1.67
H3F3AP84243 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.62□□□□□ -1.67
H3F3AP84243 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
H3F3AP84243 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
H3F3AP84243 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
H3F3AP84243 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
H3F3AP84243 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.62□□□□□ -1.67
H3F3AP84243 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
H3F3AP84243 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.62□□□□□ -1.67
H3F3AP84243 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.62□□□□□ -1.67
H3F3AP84243 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
H3F3AP84243 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
H3F3AP84243 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
H3F3AP84243 RPL12P9-201ENST00000412942 488 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 GTF3AP1-201ENST00000416942 1004 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.62□□□□□ -1.67
H3F3AP84243 OR6C64P-201ENST00000419708 825 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 AL139148.1-201ENST00000427122 680 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.62□□□□□ -1.67
H3F3AP84243 KNOP1P3-201ENST00000446933 426 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 PRPF38AP1-201ENST00000451976 933 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 HIGD1AP14-201ENST00000507617 282 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.62□□□□□ -1.67
H3F3AP84243 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
H3F3AP84243 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.62□□□□□ -1.67
H3F3AP84243 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.62□□□□□ -1.67
H3F3AP84243 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
H3F3AP84243 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
H3F3AP84243 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.62□□□□□ -1.67
H3F3AP84243 AC011447.4-201ENST00000587562 111 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 RPSAP73-201ENST00000614820 330 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 AC108359.1-201ENST00000616451 1211 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 OR8G7P-201ENST00000616658 848 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 AC099494.2-201ENST00000623371 978 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 AP002505.2-201ENST00000623585 696 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.62□□□□□ -1.67
H3F3AP84243 FRG1EP-201ENST00000634469 770 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
H3F3AP84243 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
H3F3AP84243 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
H3F3AP84243 AC022417.1-201ENST00000624768 1303 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.62□□□□□ -1.67
H3F3AP84243 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.62□□□□□ -1.67
H3F3AP84243 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
H3F3AP84243 AP005432.1-201ENST00000580891 3485 ntBASIC4.62□□□□□ -1.67
H3F3AP84243 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
H3F3AP84243 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
H3F3AP84243 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.61□□□□□ -1.67
H3F3AP84243 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H3F3AP84243 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
H3F3AP84243 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H3F3AP84243 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.61□□□□□ -1.67
H3F3AP84243 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.61□□□□□ -1.67
H3F3AP84243 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
H3F3AP84243 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
H3F3AP84243 MTHFD2P5-201ENST00000320415 844 ntBASIC4.61□□□□□ -1.67
H3F3AP84243 OR9K1P-201ENST00000326513 941 ntBASIC4.61□□□□□ -1.67
H3F3AP84243 RNA5SP223-201ENST00000365174 120 ntBASIC4.61□□□□□ -1.67
H3F3AP84243 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
H3F3AP84243 U3.36-201ENST00000408418 213 ntBASIC4.61□□□□□ -1.67
H3F3AP84243 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.61□□□□□ -1.67
H3F3AP84243 RN7SKP97-201ENST00000410966 333 ntBASIC4.61□□□□□ -1.67
H3F3AP84243 RANP7-201ENST00000418085 644 ntBASIC4.61□□□□□ -1.67
H3F3AP84243 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.61□□□□□ -1.67
H3F3AP84243 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.61□□□□□ -1.67
H3F3AP84243 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.61□□□□□ -1.67
H3F3AP84243 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.61□□□□□ -1.67
H3F3AP84243 RN7SL629P-201ENST00000489622 285 ntBASIC4.61□□□□□ -1.67
H3F3AP84243 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.61□□□□□ -1.67
H3F3AP84243 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.61□□□□□ -1.67
H3F3AP84243 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.61□□□□□ -1.67
H3F3AP84243 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.61□□□□□ -1.67
H3F3AP84243 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.61□□□□□ -1.67
H3F3AP84243 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.61□□□□□ -1.67
H3F3AP84243 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.61□□□□□ -1.67
H3F3AP84243 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.61□□□□□ -1.67
H3F3AP84243 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.61□□□□□ -1.67
H3F3AP84243 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.61□□□□□ -1.67
H3F3AP84243 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.61□□□□□ -1.67
H3F3AP84243 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.61□□□□□ -1.67
H3F3AP84243 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
H3F3AP84243 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H3F3AP84243 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms