Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
RPL39P62891 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RPL39P62891 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RPL39P62891 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RPL39P62891 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
RPL39P62891 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RPL39P62891 DDX18P4-201ENST00000511690 1966 ntBASIC3.45□□□□□ -1.86
RPL39P62891 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC3.45□□□□□ -1.86
RPL39P62891 UGT2B26P-201ENST00000508672 1613 ntBASIC3.45□□□□□ -1.86
RPL39P62891 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RPL39P62891 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RPL39P62891 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RPL39P62891 U3.35-201ENST00000408405 208 ntBASIC3.45□□□□□ -1.86
RPL39P62891 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.45□□□□□ -1.86
RPL39P62891 AL390774.1-201ENST00000411924 246 ntBASIC3.45□□□□□ -1.86
RPL39P62891 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC3.45□□□□□ -1.86
RPL39P62891 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC3.45□□□□□ -1.86
RPL39P62891 AC115283.1-201ENST00000427353 400 ntBASIC3.45□□□□□ -1.86
RPL39P62891 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC3.45□□□□□ -1.86
RPL39P62891 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.45□□□□□ -1.86
RPL39P62891 AC004938.1-201ENST00000438468 308 ntBASIC3.45□□□□□ -1.86
RPL39P62891 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC3.45□□□□□ -1.86
RPL39P62891 TDGF1P1-201ENST00000445734 527 ntBASIC3.45□□□□□ -1.86
RPL39P62891 RPL36AP39-201ENST00000445859 318 ntBASIC3.45□□□□□ -1.86
RPL39P62891 RN7SL517P-201ENST00000462240 305 ntBASIC3.45□□□□□ -1.86
RPL39P62891 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.45□□□□□ -1.86
RPL39P62891 AC015864.1-201ENST00000496512 544 ntBASIC3.45□□□□□ -1.86
RPL39P62891 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.45□□□□□ -1.86
RPL39P62891 TCP11X3P-202ENST00000514289 1254 ntBASIC3.45□□□□□ -1.86
RPL39P62891 AC026688.1-201ENST00000520639 1168 ntBASIC3.45□□□□□ -1.86
RPL39P62891 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC3.45□□□□□ -1.86
RPL39P62891 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC3.45□□□□□ -1.86
RPL39P62891 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC3.45□□□□□ -1.86
RPL39P62891 SETP1-201ENST00000556014 845 ntBASIC3.45□□□□□ -1.86
RPL39P62891 AC103968.1-201ENST00000557841 573 ntBASIC3.45□□□□□ -1.86
RPL39P62891 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC3.45□□□□□ -1.86
RPL39P62891 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC3.45□□□□□ -1.86
RPL39P62891 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC3.45□□□□□ -1.86
RPL39P62891 DPRXP4-201ENST00000578053 568 ntBASIC3.45□□□□□ -1.86
RPL39P62891 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC3.45□□□□□ -1.86
RPL39P62891 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.45□□□□□ -1.86
RPL39P62891 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC3.45□□□□□ -1.86
RPL39P62891 AL049794.2-201ENST00000616301 365 ntBASIC3.45□□□□□ -1.86
RPL39P62891 HOTTIP_3.1-201ENST00000619957 337 ntBASIC3.45□□□□□ -1.86
RPL39P62891 MIR8080-201ENST00000622224 89 ntBASIC3.45□□□□□ -1.86
RPL39P62891 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.45□□□□□ -1.86
RPL39P62891 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
RPL39P62891 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.45□□□□□ -1.86
RPL39P62891 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RPL39P62891 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
RPL39P62891 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RPL39P62891 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL39P62891 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
RPL39P62891 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL39P62891 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
RPL39P62891 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RPL39P62891 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL39P62891 ANAPC1P1-201ENST00000426186 2145 ntBASIC3.44□□□□□ -1.86
RPL39P62891 AP001157.1-201ENST00000550837 2339 ntBASIC3.44□□□□□ -1.86
RPL39P62891 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RPL39P62891 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RPL39P62891 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC3.44□□□□□ -1.86
RPL39P62891 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RPL39P62891 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RPL39P62891 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL39P62891 NUDT19P3-201ENST00000404698 555 ntBASIC3.44□□□□□ -1.86
RPL39P62891 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL39P62891 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.44□□□□□ -1.86
RPL39P62891 OR6C64P-201ENST00000419708 825 ntBASIC3.44□□□□□ -1.86
RPL39P62891 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL39P62891 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RPL39P62891 SETP9-201ENST00000423837 832 ntBASIC3.44□□□□□ -1.86
RPL39P62891 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL39P62891 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL39P62891 DNAJA1P5-201ENST00000440278 943 ntBASIC3.44□□□□□ -1.86
RPL39P62891 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC3.44□□□□□ -1.86
RPL39P62891 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL39P62891 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC3.44□□□□□ -1.86
RPL39P62891 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.44□□□□□ -1.86
RPL39P62891 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL39P62891 RPL7P45-201ENST00000455851 743 ntBASIC3.44□□□□□ -1.86
RPL39P62891 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL39P62891 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL39P62891 EIF1P7-201ENST00000487533 337 ntBASIC3.44□□□□□ -1.86
RPL39P62891 DEFB109F-201ENST00000491870 277 ntBASIC3.44□□□□□ -1.86
RPL39P62891 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL39P62891 ARL4AP1-201ENST00000503220 705 ntBASIC3.44□□□□□ -1.86
RPL39P62891 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.44□□□□□ -1.86
RPL39P62891 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.44□□□□□ -1.86
RPL39P62891 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL39P62891 AC112191.2-201ENST00000522428 333 ntBASIC3.44□□□□□ -1.86
RPL39P62891 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL39P62891 AC134349.2-201ENST00000535136 910 ntBASIC3.44□□□□□ -1.86
RPL39P62891 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
RPL39P62891 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC3.44□□□□□ -1.86
RPL39P62891 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RPL39P62891 AC079075.1-201ENST00000559543 878 ntBASIC3.44□□□□□ -1.86
RPL39P62891 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.44□□□□□ -1.86
RPL39P62891 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC3.44□□□□□ -1.86
RPL39P62891 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms