Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6□□□□□ -1.45
GFRA1P56159 IMPA1P1-201ENST00000510718 842 ntBASIC6□□□□□ -1.45
GFRA1P56159 AC110775.1-201ENST00000513721 462 ntBASIC6□□□□□ -1.45
GFRA1P56159 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC6□□□□□ -1.45
GFRA1P56159 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6□□□□□ -1.45
GFRA1P56159 RNU6-405P-201ENST00000516637 110 ntBASIC6□□□□□ -1.45
GFRA1P56159 AL139174.1-201ENST00000531489 886 ntBASIC6□□□□□ -1.45
GFRA1P56159 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6□□□□□ -1.45
GFRA1P56159 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC6□□□□□ -1.45
GFRA1P56159 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA1P56159 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC6□□□□□ -1.45
GFRA1P56159 AC026956.1-201ENST00000558741 396 ntBASIC6□□□□□ -1.45
GFRA1P56159 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6□□□□□ -1.45
GFRA1P56159 AL512347.1-201ENST00000566420 503 ntBASIC6□□□□□ -1.45
GFRA1P56159 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6□□□□□ -1.45
GFRA1P56159 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6□□□□□ -1.45
GFRA1P56159 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6□□□□□ -1.45
GFRA1P56159 AC011921.2-201ENST00000589465 152 ntBASIC6□□□□□ -1.45
GFRA1P56159 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6□□□□□ -1.45
GFRA1P56159 AL078623.1-201ENST00000602702 907 ntBASIC6□□□□□ -1.45
GFRA1P56159 AC083899.3-201ENST00000603413 594 ntBASIC6□□□□□ -1.45
GFRA1P56159 AC114477.1-201ENST00000605097 605 ntBASIC6□□□□□ -1.45
GFRA1P56159 AC068726.1-201ENST00000610993 341 ntBASIC6□□□□□ -1.45
GFRA1P56159 OR1N1-202ENST00000619659 939 ntBASIC6□□□□□ -1.45
GFRA1P56159 U1.31-201ENST00000620022 160 ntBASIC6□□□□□ -1.45
GFRA1P56159 AL356266.1-201ENST00000623311 483 ntBASIC6□□□□□ -1.45
GFRA1P56159 AC025048.6-202ENST00000627667 438 ntBASIC6□□□□□ -1.45
GFRA1P56159 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
GFRA1P56159 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6□□□□□ -1.45
GFRA1P56159 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6□□□□□ -1.45
GFRA1P56159 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6□□□□□ -1.45
GFRA1P56159 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
GFRA1P56159 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6□□□□□ -1.45
GFRA1P56159 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
GFRA1P56159 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA1P56159 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
GFRA1P56159 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6□□□□□ -1.45
GFRA1P56159 AC107982.1-201ENST00000507171 1300 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA1P56159 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA1P56159 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA1P56159 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA1P56159 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
GFRA1P56159 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA1P56159 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
GFRA1P56159 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA1P56159 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA1P56159 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
GFRA1P56159 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 Y_RNA.302-201ENST00000364997 102 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA1P56159 Y_RNA.516-201ENST00000384541 124 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 AL133260.1-201ENST00000405720 405 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 AL133264.1-201ENST00000407157 562 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 Y_RNA.604-201ENST00000410574 102 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA1P56159 MTCYBP38-201ENST00000417160 1123 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 AL929472.1-201ENST00000417484 429 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
GFRA1P56159 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 AC002069.1-201ENST00000429649 1159 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
GFRA1P56159 TXNP5-201ENST00000441043 315 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 TCEA1P3-201ENST00000443005 880 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA1P56159 YWHAQP9-201ENST00000445891 512 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 CEACAMP5-201ENST00000448037 961 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA1P56159 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.99□□□□□ -1.45
GFRA1P56159 AC093870.1-201ENST00000506837 213 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA1P56159 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA1P56159 MTND4LP26-201ENST00000518144 282 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA1P56159 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA1P56159 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA1P56159 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.99□□□□□ -1.45
GFRA1P56159 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.99□□□□□ -1.45
GFRA1P56159 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.99□□□□□ -1.45
GFRA1P56159 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.99□□□□□ -1.45
GFRA1P56159 MTCYBP41-201ENST00000528913 1123 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA1P56159 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.99□□□□□ -1.45
GFRA1P56159 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.99□□□□□ -1.45
GFRA1P56159 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.99□□□□□ -1.45
GFRA1P56159 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.99□□□□□ -1.45
GFRA1P56159 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.99□□□□□ -1.45
GFRA1P56159 SNORD96A-201ENST00000606577 79 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.99□□□□□ -1.45
GFRA1P56159 AL354718.1-201ENST00000619764 589 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms