Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC023310.2-201ENST00000553844 547 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.51□□□□□ -1.53
SUMO3P55854 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.51□□□□□ -1.53
SUMO3P55854 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.51□□□□□ -1.53
SUMO3P55854 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.51□□□□□ -1.53
SUMO3P55854 AC021749.1-201ENST00000604322 607 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 AC124916.2-201ENST00000604416 224 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 AC009779.8-202ENST00000607990 932 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 MIR7109-201ENST00000613748 65 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 U1.25-201ENST00000614085 162 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 U6.48-201ENST00000618523 106 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 AC018659.2-201ENST00000624690 715 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 RNF6P1-201ENST00000444889 1784 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.51□□□□□ -1.53
SUMO3P55854 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SUMO3P55854 AC005261.4-201ENST00000600047 1385 ntBASIC5.51□□□□□ -1.53
SUMO3P55854 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
SUMO3P55854 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.51□□□□□ -1.53
SUMO3P55854 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.51□□□□□ -1.53
SUMO3P55854 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SUMO3P55854 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.51□□□□□ -1.53
SUMO3P55854 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SUMO3P55854 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SUMO3P55854 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.5□□□□□ -1.53
SUMO3P55854 SAMMSON-210ENST00000641260 1308 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.5□□□□□ -1.53
SUMO3P55854 AL355377.1-201ENST00000621125 1653 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 AC020656.2-201ENST00000613291 5309 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SUMO3P55854 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.5□□□□□ -1.53
SUMO3P55854 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
SUMO3P55854 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
SUMO3P55854 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 RNA5SP110-201ENST00000362638 115 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 RNU6-317P-201ENST00000384031 107 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.5□□□□□ -1.53
SUMO3P55854 AL049545.1-201ENST00000401856 572 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 AL079342.2-201ENST00000403367 482 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.5□□□□□ -1.53
SUMO3P55854 SNORA11C-201ENST00000408532 129 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.5□□□□□ -1.53
SUMO3P55854 RNU6-77P-201ENST00000410554 91 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 MTND4LP17-201ENST00000414607 293 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 OR4K6P-201ENST00000416478 897 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.5□□□□□ -1.53
SUMO3P55854 NMD3P2-201ENST00000421815 761 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.5□□□□□ -1.53
SUMO3P55854 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.5□□□□□ -1.53
SUMO3P55854 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.5□□□□□ -1.53
SUMO3P55854 NPM1P22-201ENST00000427761 952 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.5□□□□□ -1.53
SUMO3P55854 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.5□□□□□ -1.53
SUMO3P55854 RPL7P34-201ENST00000433316 712 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 HMGB1P45-201ENST00000435986 653 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 AC234064.1-201ENST00000436312 247 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 AC023141.3-201ENST00000436698 278 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.5□□□□□ -1.53
SUMO3P55854 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.5□□□□□ -1.53
SUMO3P55854 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.5□□□□□ -1.53
SUMO3P55854 HMGB1P4-201ENST00000455362 567 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 RPL23AP12-201ENST00000467573 473 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 RN7SL649P-201ENST00000496974 275 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.5□□□□□ -1.53
SUMO3P55854 AC093534.1-201ENST00000504977 132 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 AC113347.3-201ENST00000509113 148 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.5□□□□□ -1.53
SUMO3P55854 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.5□□□□□ -1.53
SUMO3P55854 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.5□□□□□ -1.53
SUMO3P55854 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.5□□□□□ -1.53
SUMO3P55854 AC084121.1-201ENST00000533882 835 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.5□□□□□ -1.53
SUMO3P55854 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 NANOGNBP2-201ENST00000544753 553 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.5□□□□□ -1.53
SUMO3P55854 AC090695.1-201ENST00000561269 1222 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 AC023813.2-201ENST00000564321 469 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 AC015688.2-201ENST00000584523 262 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.5□□□□□ -1.53
SUMO3P55854 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.5□□□□□ -1.53
SUMO3P55854 AC092954.1-201ENST00000609121 445 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 AC092266.1-201ENST00000610958 165 ntBASIC5.5□□□□□ -1.53
SUMO3P55854 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SUMO3P55854 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SUMO3P55854 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms