Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC106730.2-201ENST00000566641 540 ntBASIC5.75□□□□□ -1.49
VCPP55072 H3F3BP2-201ENST00000583907 357 ntBASIC5.75□□□□□ -1.49
VCPP55072 MIR7853-201ENST00000584820 132 ntBASIC5.75□□□□□ -1.49
VCPP55072 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.75□□□□□ -1.49
VCPP55072 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.75□□□□□ -1.49
VCPP55072 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VCPP55072 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.75□□□□□ -1.49
VCPP55072 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
VCPP55072 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VCPP55072 MAPK10-328ENST00000641553 4009 ntBASIC5.75□□□□□ -1.49
VCPP55072 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.75□□□□□ -1.49
VCPP55072 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.75□□□□□ -1.49
VCPP55072 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VCPP55072 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
VCPP55072 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.74□□□□□ -1.49
VCPP55072 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
VCPP55072 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
VCPP55072 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
VCPP55072 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VCPP55072 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.74□□□□□ -1.49
VCPP55072 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VCPP55072 RNU1-32P-201ENST00000363937 159 ntBASIC5.74□□□□□ -1.49
VCPP55072 RNVU1-6-201ENST00000364688 164 ntBASIC5.74□□□□□ -1.49
VCPP55072 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.74□□□□□ -1.49
VCPP55072 SNORA16A-201ENST00000384342 137 ntBASIC5.74□□□□□ -1.49
VCPP55072 RNA5SP339-201ENST00000390987 122 ntBASIC5.74□□□□□ -1.49
VCPP55072 AL009179.1-201ENST00000406085 265 ntBASIC5.74□□□□□ -1.49
VCPP55072 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.74□□□□□ -1.49
VCPP55072 AC234781.4-201ENST00000419384 244 ntBASIC5.74□□□□□ -1.49
VCPP55072 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.74□□□□□ -1.49
VCPP55072 TAAR4P-201ENST00000454843 1039 ntBASIC5.74□□□□□ -1.49
VCPP55072 RN7SL591P-201ENST00000496150 292 ntBASIC5.74□□□□□ -1.49
VCPP55072 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.74□□□□□ -1.49
VCPP55072 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.74□□□□□ -1.49
VCPP55072 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.74□□□□□ -1.49
VCPP55072 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.74□□□□□ -1.49
VCPP55072 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.74□□□□□ -1.49
VCPP55072 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.74□□□□□ -1.49
VCPP55072 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VCPP55072 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.74□□□□□ -1.49
VCPP55072 PCNPP1-201ENST00000552501 511 ntBASIC5.74□□□□□ -1.49
VCPP55072 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
VCPP55072 AC209154.1-201ENST00000582156 337 ntBASIC5.74□□□□□ -1.49
VCPP55072 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.74□□□□□ -1.49
VCPP55072 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.74□□□□□ -1.49
VCPP55072 RNF138P2-201ENST00000603490 592 ntBASIC5.74□□□□□ -1.49
VCPP55072 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.74□□□□□ -1.49
VCPP55072 MT-RNR2-201ENST00000387347 1559 ntBASIC5.74□□□□□ -1.49
VCPP55072 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.74□□□□□ -1.49
VCPP55072 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
VCPP55072 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.74□□□□□ -1.49
VCPP55072 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VCPP55072 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VCPP55072 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VCPP55072 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
VCPP55072 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VCPP55072 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.73□□□□□ -1.49
VCPP55072 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VCPP55072 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VCPP55072 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VCPP55072 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
VCPP55072 CASC19-221ENST00000641309 1382 ntBASIC5.73□□□□□ -1.49
VCPP55072 AC093849.1-201ENST00000563631 2209 ntBASIC5.73□□□□□ -1.49
VCPP55072 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VCPP55072 RN7SKP104-201ENST00000362605 328 ntBASIC5.73□□□□□ -1.49
VCPP55072 SNORA62-201ENST00000365493 153 ntBASIC5.73□□□□□ -1.49
VCPP55072 AC079809.1-201ENST00000415468 276 ntBASIC5.73□□□□□ -1.49
VCPP55072 AC007161.1-204ENST00000423039 460 ntBASIC5.73□□□□□ -1.49
VCPP55072 AL034379.1-201ENST00000423216 253 ntBASIC5.73□□□□□ -1.49
VCPP55072 AL121578.1-201ENST00000428051 892 ntBASIC5.73□□□□□ -1.49
VCPP55072 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.73□□□□□ -1.49
VCPP55072 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.73□□□□□ -1.49
VCPP55072 FAM96AP1-201ENST00000430879 482 ntBASIC5.73□□□□□ -1.49
VCPP55072 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.73□□□□□ -1.49
VCPP55072 AC073648.4-201ENST00000442655 781 ntBASIC5.73□□□□□ -1.49
VCPP55072 AC092106.1-201ENST00000444291 373 ntBASIC5.73□□□□□ -1.49
VCPP55072 AC092324.1-201ENST00000468671 324 ntBASIC5.73□□□□□ -1.49
VCPP55072 AC090114.3-201ENST00000479267 829 ntBASIC5.73□□□□□ -1.49
VCPP55072 RN7SL447P-201ENST00000494711 245 ntBASIC5.73□□□□□ -1.49
VCPP55072 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.73□□□□□ -1.49
VCPP55072 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.73□□□□□ -1.49
VCPP55072 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.73□□□□□ -1.49
VCPP55072 RFPL4AP3-201ENST00000515267 345 ntBASIC5.73□□□□□ -1.49
VCPP55072 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.73□□□□□ -1.49
VCPP55072 EIF4EP5-201ENST00000528228 640 ntBASIC5.73□□□□□ -1.49
VCPP55072 BLZF2P-201ENST00000553776 1130 ntBASIC5.73□□□□□ -1.49
VCPP55072 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.73□□□□□ -1.49
VCPP55072 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VCPP55072 AC114947.2-201ENST00000565748 2125 ntBASIC5.73□□□□□ -1.49
VCPP55072 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.73□□□□□ -1.49
VCPP55072 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.73□□□□□ -1.49
VCPP55072 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.73□□□□□ -1.49
VCPP55072 AL133406.3-201ENST00000606817 541 ntBASIC5.73□□□□□ -1.49
VCPP55072 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.73□□□□□ -1.49
VCPP55072 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.73□□□□□ -1.49
VCPP55072 AC083809.1-201ENST00000615051 472 ntBASIC5.73□□□□□ -1.49
VCPP55072 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
VCPP55072 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VCPP55072 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.73□□□□□ -1.49
VCPP55072 HSPA8P14-201ENST00000552265 1805 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms