Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 USP9YP9-201ENST00000429406 715 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 AL161722.2-201ENST00000434731 981 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 MAPRE1P3-201ENST00000435438 796 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.6□□□□□ -1.67
HCFC1P51610 LINC02210-201ENST00000444561 288 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 RBMY2TP-201ENST00000451162 947 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.6□□□□□ -1.67
HCFC1P51610 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.6□□□□□ -1.67
HCFC1P51610 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.6□□□□□ -1.67
HCFC1P51610 NPM1P28-201ENST00000492269 840 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 RPL23AP72-201ENST00000492447 435 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 CEACAMP10-202ENST00000495431 496 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.6□□□□□ -1.67
HCFC1P51610 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.6□□□□□ -1.67
HCFC1P51610 AC109464.1-201ENST00000511091 819 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 BTF3P13-201ENST00000513224 490 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.6□□□□□ -1.67
HCFC1P51610 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.6□□□□□ -1.67
HCFC1P51610 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.6□□□□□ -1.67
HCFC1P51610 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.6□□□□□ -1.67
HCFC1P51610 AC093524.1-201ENST00000564266 1094 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 AC020915.5-201ENST00000596836 964 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.6□□□□□ -1.67
HCFC1P51610 AL031320.1-201ENST00000604177 357 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 AC098935.2-201ENST00000604222 466 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 AL023583.1-201ENST00000607518 1143 ntBASIC4.6□□□□□ -1.67
HCFC1P51610 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.6□□□□□ -1.67
HCFC1P51610 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.6□□□□□ -1.67
HCFC1P51610 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HCFC1P51610 AL137058.3-201ENST00000624531 3099 ntBASIC4.59□□□□□ -1.67
HCFC1P51610 AC093671.1-201ENST00000624981 2929 ntBASIC4.59□□□□□ -1.67
HCFC1P51610 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HCFC1P51610 AL359715.3-201ENST00000569267 2123 ntBASIC4.59□□□□□ -1.67
HCFC1P51610 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.59□□□□□ -1.67
HCFC1P51610 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HCFC1P51610 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HCFC1P51610 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HCFC1P51610 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.59□□□□□ -1.67
HCFC1P51610 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HCFC1P51610 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HCFC1P51610 RNA5SP90-201ENST00000364801 99 ntBASIC4.59□□□□□ -1.67
HCFC1P51610 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HCFC1P51610 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HCFC1P51610 MRPS21P2-201ENST00000424704 264 ntBASIC4.59□□□□□ -1.67
HCFC1P51610 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.59□□□□□ -1.67
HCFC1P51610 SNORD125-201ENST00000459538 96 ntBASIC4.59□□□□□ -1.67
HCFC1P51610 CR383656.1-201ENST00000484916 377 ntBASIC4.59□□□□□ -1.67
HCFC1P51610 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.59□□□□□ -1.67
HCFC1P51610 COX6B1P5-201ENST00000509843 249 ntBASIC4.59□□□□□ -1.67
HCFC1P51610 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.59□□□□□ -1.67
HCFC1P51610 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.59□□□□□ -1.67
HCFC1P51610 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.59□□□□□ -1.67
HCFC1P51610 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.59□□□□□ -1.67
HCFC1P51610 AC092490.3-201ENST00000545370 572 ntBASIC4.59□□□□□ -1.67
HCFC1P51610 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.59□□□□□ -1.67
HCFC1P51610 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HCFC1P51610 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HCFC1P51610 AL513327.3-201ENST00000602618 469 ntBASIC4.59□□□□□ -1.67
HCFC1P51610 AP005432.2-201ENST00000608162 586 ntBASIC4.59□□□□□ -1.67
HCFC1P51610 MTCO1P1-201ENST00000624263 1081 ntBASIC4.59□□□□□ -1.67
HCFC1P51610 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HCFC1P51610 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HCFC1P51610 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HCFC1P51610 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HCFC1P51610 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HCFC1P51610 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HCFC1P51610 UGT2B24P-201ENST00000514441 1597 ntBASIC4.59□□□□□ -1.68
HCFC1P51610 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.59□□□□□ -1.68
HCFC1P51610 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.59□□□□□ -1.68
HCFC1P51610 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HCFC1P51610 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.59□□□□□ -1.68
HCFC1P51610 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HCFC1P51610 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.59□□□□□ -1.68
HCFC1P51610 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.58□□□□□ -1.68
HCFC1P51610 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.58□□□□□ -1.68
HCFC1P51610 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HCFC1P51610 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HCFC1P51610 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.58□□□□□ -1.68
HCFC1P51610 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.58□□□□□ -1.68
HCFC1P51610 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.58□□□□□ -1.68
HCFC1P51610 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HCFC1P51610 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.58□□□□□ -1.68
HCFC1P51610 RAD1P2-201ENST00000446414 663 ntBASIC4.58□□□□□ -1.68
HCFC1P51610 AC073264.2-201ENST00000448886 166 ntBASIC4.58□□□□□ -1.68
HCFC1P51610 AC104634.1-201ENST00000452720 462 ntBASIC4.58□□□□□ -1.68
HCFC1P51610 RPL5P22-201ENST00000480199 884 ntBASIC4.58□□□□□ -1.68
HCFC1P51610 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.58□□□□□ -1.68
HCFC1P51610 COL6A4P2-205ENST00000509855 506 ntBASIC4.58□□□□□ -1.68
HCFC1P51610 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.58□□□□□ -1.68
HCFC1P51610 CCNHP1-201ENST00000513311 678 ntBASIC4.58□□□□□ -1.68
HCFC1P51610 AC021733.2-201ENST00000518830 497 ntBASIC4.58□□□□□ -1.68
HCFC1P51610 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HCFC1P51610 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
HCFC1P51610 AL049874.4-201ENST00000557593 255 ntBASIC4.58□□□□□ -1.68
HCFC1P51610 AC234775.3-201ENST00000564612 656 ntBASIC4.58□□□□□ -1.68
HCFC1P51610 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HCFC1P51610 AC132825.8-201ENST00000640783 297 ntBASIC4.58□□□□□ -1.68
HCFC1P51610 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HCFC1P51610 AC010168.2-201ENST00000562691 5428 ntBASIC4.58□□□□□ -1.68
HCFC1P51610 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms