Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC022726.1-201ENST00000587475 207 ntBASIC8.78□□□□□ -1
SMARCA4P51532 CASC19-243ENST00000641588 1546 ntBASIC8.78□□□□□ -1
SMARCA4P51532 OFD1P9Y-201ENST00000417699 1491 ntBASIC8.78□□□□□ -1
SMARCA4P51532 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC8.78□□□□□ -1
SMARCA4P51532 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
SMARCA4P51532 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
SMARCA4P51532 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC8.77□□□□□ -1.01
SMARCA4P51532 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC8.77□□□□□ -1.01
SMARCA4P51532 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC8.77□□□□□ -1.01
SMARCA4P51532 UQCRBP1-201ENST00000421129 336 ntBASIC8.77□□□□□ -1.01
SMARCA4P51532 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC8.77□□□□□ -1.01
SMARCA4P51532 RNA5SP464-201ENST00000516251 108 ntBASIC8.77□□□□□ -1.01
SMARCA4P51532 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC8.77□□□□□ -1.01
SMARCA4P51532 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
SMARCA4P51532 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SMARCA4P51532 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC8.77□□□□□ -1.01
SMARCA4P51532 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SMARCA4P51532 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SMARCA4P51532 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
SMARCA4P51532 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
SMARCA4P51532 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SMARCA4P51532 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SMARCA4P51532 SNORA73.1-201ENST00000363107 205 ntBASIC8.76□□□□□ -1.01
SMARCA4P51532 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC8.76□□□□□ -1.01
SMARCA4P51532 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC8.76□□□□□ -1.01
SMARCA4P51532 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC8.76□□□□□ -1.01
SMARCA4P51532 AC100847.1-201ENST00000611316 481 ntBASIC8.76□□□□□ -1.01
SMARCA4P51532 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC8.76□□□□□ -1.01
SMARCA4P51532 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SMARCA4P51532 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
SMARCA4P51532 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SMARCA4P51532 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
SMARCA4P51532 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SMARCA4P51532 RNA5SP388-201ENST00000362584 119 ntBASIC8.76□□□□□ -1.01
SMARCA4P51532 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
SMARCA4P51532 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC8.76□□□□□ -1.01
SMARCA4P51532 FHP1-201ENST00000442741 703 ntBASIC8.76□□□□□ -1.01
SMARCA4P51532 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
SMARCA4P51532 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC8.76□□□□□ -1.01
SMARCA4P51532 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SMARCA4P51532 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC8.76□□□□□ -1.01
SMARCA4P51532 MIR3939-201ENST00000582614 106 ntBASIC8.76□□□□□ -1.01
SMARCA4P51532 VN1R85P-201ENST00000601587 426 ntBASIC8.76□□□□□ -1.01
SMARCA4P51532 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC8.76□□□□□ -1.01
SMARCA4P51532 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SMARCA4P51532 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC8.75□□□□□ -1.01
SMARCA4P51532 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC8.75□□□□□ -1.01
SMARCA4P51532 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SMARCA4P51532 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC8.75□□□□□ -1.01
SMARCA4P51532 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC8.75□□□□□ -1.01
SMARCA4P51532 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC8.75□□□□□ -1.01
SMARCA4P51532 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC8.75□□□□□ -1.01
SMARCA4P51532 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SMARCA4P51532 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SMARCA4P51532 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
SMARCA4P51532 ST13P16-201ENST00000401760 781 ntBASIC8.75□□□□□ -1.01
SMARCA4P51532 AC116553.2-201ENST00000564203 463 ntBASIC8.75□□□□□ -1.01
SMARCA4P51532 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SMARCA4P51532 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC8.75□□□□□ -1.01
SMARCA4P51532 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC8.75□□□□□ -1.01
SMARCA4P51532 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
SMARCA4P51532 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC8.75□□□□□ -1.01
SMARCA4P51532 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC8.75□□□□□ -1.01
SMARCA4P51532 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC8.74□□□□□ -1.01
SMARCA4P51532 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC8.74□□□□□ -1.01
SMARCA4P51532 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SMARCA4P51532 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
SMARCA4P51532 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
SMARCA4P51532 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SMARCA4P51532 AC008758.3-201ENST00000507003 1829 ntBASIC8.74□□□□□ -1.01
SMARCA4P51532 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.74□□□□□ -1.01
SMARCA4P51532 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
SMARCA4P51532 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SMARCA4P51532 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SMARCA4P51532 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.74□□□□□ -1.01
SMARCA4P51532 GAS5-208ENST00000425771 242 ntTSL 3 BASIC8.74□□□□□ -1.01
SMARCA4P51532 RPL34P27-201ENST00000428810 349 ntBASIC8.74□□□□□ -1.01
SMARCA4P51532 AC079168.2-201ENST00000453977 416 ntBASIC8.74□□□□□ -1.01
SMARCA4P51532 AC091180.1-201ENST00000462104 372 ntBASIC8.74□□□□□ -1.01
SMARCA4P51532 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC8.74□□□□□ -1.01
SMARCA4P51532 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.74□□□□□ -1.01
SMARCA4P51532 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC8.74□□□□□ -1.01
SMARCA4P51532 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC8.74□□□□□ -1.01
SMARCA4P51532 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SMARCA4P51532 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC8.74□□□□□ -1.01
SMARCA4P51532 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.74□□□□□ -1.01
SMARCA4P51532 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
SMARCA4P51532 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC8.74□□□□□ -1.01
SMARCA4P51532 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
SMARCA4P51532 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SMARCA4P51532 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
SMARCA4P51532 OR4K17-201ENST00000315543 1032 ntBASIC8.73□□□□□ -1.01
SMARCA4P51532 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
SMARCA4P51532 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC8.73□□□□□ -1.01
SMARCA4P51532 YWHAZP2-201ENST00000440317 728 ntBASIC8.73□□□□□ -1.01
SMARCA4P51532 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.73□□□□□ -1.01
SMARCA4P51532 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC8.73□□□□□ -1.01
SMARCA4P51532 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC8.73□□□□□ -1.01
SMARCA4P51532 AC010618.1-201ENST00000469924 477 ntBASIC8.73□□□□□ -1.01
SMARCA4P51532 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms