Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.24□□□□□ -1.57
FDFT1P37268 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.24□□□□□ -1.57
FDFT1P37268 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.24□□□□□ -1.57
FDFT1P37268 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.24□□□□□ -1.57
FDFT1P37268 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.24□□□□□ -1.57
FDFT1P37268 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.24□□□□□ -1.57
FDFT1P37268 AC004980.3-201ENST00000447046 365 ntBASIC5.24□□□□□ -1.57
FDFT1P37268 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.24□□□□□ -1.57
FDFT1P37268 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.24□□□□□ -1.57
FDFT1P37268 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.24□□□□□ -1.57
FDFT1P37268 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.24□□□□□ -1.57
FDFT1P37268 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.24□□□□□ -1.57
FDFT1P37268 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.24□□□□□ -1.57
FDFT1P37268 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.24□□□□□ -1.57
FDFT1P37268 NDUFB4P11-201ENST00000560510 395 ntBASIC5.24□□□□□ -1.57
FDFT1P37268 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FDFT1P37268 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.24□□□□□ -1.57
FDFT1P37268 AC011840.5-201ENST00000582125 771 ntBASIC5.24□□□□□ -1.57
FDFT1P37268 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.24□□□□□ -1.57
FDFT1P37268 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.24□□□□□ -1.57
FDFT1P37268 AC004477.3-201ENST00000614061 590 ntBASIC5.24□□□□□ -1.57
FDFT1P37268 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FDFT1P37268 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
FDFT1P37268 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.24□□□□□ -1.57
FDFT1P37268 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
FDFT1P37268 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
FDFT1P37268 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
FDFT1P37268 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.24□□□□□ -1.57
FDFT1P37268 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
FDFT1P37268 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.24□□□□□ -1.57
FDFT1P37268 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
FDFT1P37268 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.24□□□□□ -1.57
FDFT1P37268 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
FDFT1P37268 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
FDFT1P37268 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
FDFT1P37268 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
FDFT1P37268 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FDFT1P37268 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
FDFT1P37268 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
FDFT1P37268 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FDFT1P37268 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FDFT1P37268 OR56A4-201ENST00000330728 1209 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 RNA5SP183-201ENST00000362452 119 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
FDFT1P37268 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.23□□□□□ -1.57
FDFT1P37268 AC108075.1-201ENST00000424692 529 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
FDFT1P37268 AC079807.1-201ENST00000429993 481 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.23□□□□□ -1.57
FDFT1P37268 RPL35AP21-201ENST00000437667 333 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 SPRYD7P1-201ENST00000443861 570 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 MRPL35P2-201ENST00000448009 511 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FDFT1P37268 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.23□□□□□ -1.57
FDFT1P37268 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.23□□□□□ -1.57
FDFT1P37268 RN7SL441P-201ENST00000492388 296 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 AC073073.1-201ENST00000493920 463 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.23□□□□□ -1.57
FDFT1P37268 UGT2A3P7-201ENST00000510485 734 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.23□□□□□ -1.57
FDFT1P37268 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.23□□□□□ -1.57
FDFT1P37268 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.23□□□□□ -1.57
FDFT1P37268 SNORD95-201ENST00000579879 68 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 AP005262.1-201ENST00000582646 997 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 QTRT1P1-201ENST00000604344 1078 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.23□□□□□ -1.57
FDFT1P37268 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.23□□□□□ -1.57
FDFT1P37268 AC090527.3-201ENST00000619041 548 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
FDFT1P37268 AC073869.10-201ENST00000642016 354 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
FDFT1P37268 AL022393.1-201ENST00000625142 1677 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.23□□□□□ -1.57
FDFT1P37268 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.23□□□□□ -1.57
FDFT1P37268 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
FDFT1P37268 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
FDFT1P37268 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
FDFT1P37268 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.23□□□□□ -1.57
FDFT1P37268 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.23□□□□□ -1.57
FDFT1P37268 CR383656.5-201ENST00000547616 1340 ntBASIC5.23□□□□□ -1.57
FDFT1P37268 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
FDFT1P37268 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
FDFT1P37268 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.22□□□□□ -1.57
FDFT1P37268 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
FDFT1P37268 AL672167.1-204ENST00000641875 3017 ntBASIC5.22□□□□□ -1.57
FDFT1P37268 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.22□□□□□ -1.57
FDFT1P37268 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
FDFT1P37268 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
FDFT1P37268 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
FDFT1P37268 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
FDFT1P37268 RN7SKP113-201ENST00000363891 295 ntBASIC5.22□□□□□ -1.57
FDFT1P37268 RN7SKP15-201ENST00000364742 309 ntBASIC5.22□□□□□ -1.57
FDFT1P37268 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
FDFT1P37268 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
FDFT1P37268 UBBP2-201ENST00000376781 231 ntBASIC5.22□□□□□ -1.57
FDFT1P37268 SNORA2.3-201ENST00000383920 135 ntBASIC5.22□□□□□ -1.57
FDFT1P37268 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
FDFT1P37268 RPL10P10-201ENST00000403509 664 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms