Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC099494.2-201ENST00000623371 978 ntBASIC5.17□□□□□ -1.58
HMGCLP35914 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.17□□□□□ -1.58
HMGCLP35914 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGCLP35914 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.17□□□□□ -1.58
HMGCLP35914 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCLP35914 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGCLP35914 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGCLP35914 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.17□□□□□ -1.58
HMGCLP35914 AC022417.1-201ENST00000624768 1303 ntBASIC5.17□□□□□ -1.58
HMGCLP35914 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.17□□□□□ -1.58
HMGCLP35914 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
HMGCLP35914 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCLP35914 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCLP35914 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HMGCLP35914 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.16□□□□□ -1.58
HMGCLP35914 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HMGCLP35914 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCLP35914 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HMGCLP35914 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCLP35914 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HMGCLP35914 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCLP35914 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
HMGCLP35914 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HMGCLP35914 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HMGCLP35914 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HMGCLP35914 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCLP35914 RN7SKP126-201ENST00000411143 300 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCLP35914 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HMGCLP35914 AL139148.1-201ENST00000427122 680 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 MTCO3P17-201ENST00000443775 513 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCLP35914 AL049874.2-201ENST00000492636 288 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCLP35914 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCLP35914 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCLP35914 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCLP35914 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCLP35914 AC084033.1-201ENST00000550830 633 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.16□□□□□ -1.58
HMGCLP35914 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.16□□□□□ -1.58
HMGCLP35914 AC015849.6-201ENST00000605454 474 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 AP000894.4-201ENST00000610185 483 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 AP005212.4-201ENST00000614206 710 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 RPSAP73-201ENST00000614820 330 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCLP35914 AC022960.2-201ENST00000616300 666 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 BNIP3P41-202ENST00000616656 861 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.16□□□□□ -1.58
HMGCLP35914 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.16□□□□□ -1.58
HMGCLP35914 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCLP35914 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCLP35914 AL022311.1-201ENST00000623726 19416 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCLP35914 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.16□□□□□ -1.58
HMGCLP35914 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.16□□□□□ -1.58
HMGCLP35914 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
HMGCLP35914 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCLP35914 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HMGCLP35914 MIPEPP2-201ENST00000422560 1819 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 CR788268.1-201ENST00000603931 1809 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
HMGCLP35914 CASC19-221ENST00000641309 1382 ntBASIC5.16□□□□□ -1.58
HMGCLP35914 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGCLP35914 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGCLP35914 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
HMGCLP35914 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.15□□□□□ -1.58
HMGCLP35914 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.15□□□□□ -1.58
HMGCLP35914 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGCLP35914 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.15□□□□□ -1.58
HMGCLP35914 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
HMGCLP35914 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HMGCLP35914 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
HMGCLP35914 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HMGCLP35914 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
HMGCLP35914 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMGCLP35914 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMGCLP35914 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMGCLP35914 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGCLP35914 PCNPP4-201ENST00000414817 517 ntBASIC5.15□□□□□ -1.59
HMGCLP35914 AC005033.1-201ENST00000428904 813 ntBASIC5.15□□□□□ -1.59
HMGCLP35914 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGCLP35914 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGCLP35914 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGCLP35914 KNOP1P3-201ENST00000446933 426 ntBASIC5.15□□□□□ -1.59
HMGCLP35914 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGCLP35914 RN7SL629P-201ENST00000489622 285 ntBASIC5.15□□□□□ -1.59
HMGCLP35914 AC069304.1-201ENST00000491593 704 ntBASIC5.15□□□□□ -1.59
HMGCLP35914 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGCLP35914 AC022832.1-201ENST00000530718 645 ntBASIC5.15□□□□□ -1.59
HMGCLP35914 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGCLP35914 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGCLP35914 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.15□□□□□ -1.59
HMGCLP35914 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGCLP35914 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.15□□□□□ -1.59
HMGCLP35914 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGCLP35914 PRPF19P1-201ENST00000584766 898 ntBASIC5.15□□□□□ -1.59
HMGCLP35914 AC011447.4-201ENST00000587562 111 ntBASIC5.15□□□□□ -1.59
HMGCLP35914 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGCLP35914 AP005432.2-201ENST00000608162 586 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms