Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.12□□□□□ -1.59
RPA3P35244 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RPA3P35244 AC004825.1-201ENST00000555068 586 ntBASIC5.12□□□□□ -1.59
RPA3P35244 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.12□□□□□ -1.59
RPA3P35244 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.12□□□□□ -1.59
RPA3P35244 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RPA3P35244 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RPA3P35244 MIR3176-201ENST00000582210 90 ntBASIC5.12□□□□□ -1.59
RPA3P35244 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.12□□□□□ -1.59
RPA3P35244 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.12□□□□□ -1.59
RPA3P35244 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.12□□□□□ -1.59
RPA3P35244 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.12□□□□□ -1.59
RPA3P35244 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
RPA3P35244 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RPA3P35244 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RPA3P35244 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RPA3P35244 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.12□□□□□ -1.59
RPA3P35244 SALL4P2-201ENST00000423288 2910 ntBASIC5.12□□□□□ -1.59
RPA3P35244 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.12□□□□□ -1.59
RPA3P35244 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RPA3P35244 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RPA3P35244 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RPA3P35244 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RPA3P35244 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RPA3P35244 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RPA3P35244 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RPA3P35244 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RPA3P35244 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RPA3P35244 MIR1286-201ENST00000408112 78 ntBASIC5.11□□□□□ -1.59
RPA3P35244 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.11□□□□□ -1.59
RPA3P35244 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.11□□□□□ -1.59
RPA3P35244 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.11□□□□□ -1.59
RPA3P35244 AC093166.2-201ENST00000455969 1017 ntBASIC5.11□□□□□ -1.59
RPA3P35244 AC020779.1-201ENST00000478757 796 ntBASIC5.11□□□□□ -1.59
RPA3P35244 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RPA3P35244 RNA5SP249-201ENST00000516127 99 ntBASIC5.11□□□□□ -1.59
RPA3P35244 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.11□□□□□ -1.59
RPA3P35244 AC021733.2-201ENST00000518830 497 ntBASIC5.11□□□□□ -1.59
RPA3P35244 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.11□□□□□ -1.59
RPA3P35244 AC005868.1-201ENST00000536421 331 ntBASIC5.11□□□□□ -1.59
RPA3P35244 MIR4489-201ENST00000578869 62 ntBASIC5.11□□□□□ -1.59
RPA3P35244 RN7SL753P-201ENST00000581238 290 ntBASIC5.11□□□□□ -1.59
RPA3P35244 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.11□□□□□ -1.59
RPA3P35244 AC069307.1-201ENST00000602820 447 ntBASIC5.11□□□□□ -1.59
RPA3P35244 AL512329.2-201ENST00000607350 548 ntBASIC5.11□□□□□ -1.59
RPA3P35244 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.11□□□□□ -1.59
RPA3P35244 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RPA3P35244 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RPA3P35244 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.11□□□□□ -1.59
RPA3P35244 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.11□□□□□ -1.59
RPA3P35244 AL022322.2-201ENST00000624072 20397 ntBASIC5.1□□□□□ -1.59
RPA3P35244 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPA3P35244 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPA3P35244 RNA5SP183-201ENST00000362452 119 ntBASIC5.1□□□□□ -1.59
RPA3P35244 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.1□□□□□ -1.59
RPA3P35244 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPA3P35244 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPA3P35244 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.1□□□□□ -1.59
RPA3P35244 RN7SKP229-201ENST00000410465 302 ntBASIC5.1□□□□□ -1.59
RPA3P35244 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.1□□□□□ -1.59
RPA3P35244 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.1□□□□□ -1.59
RPA3P35244 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.1□□□□□ -1.59
RPA3P35244 AC108075.1-201ENST00000424692 529 ntBASIC5.1□□□□□ -1.59
RPA3P35244 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.1□□□□□ -1.59
RPA3P35244 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.1□□□□□ -1.59
RPA3P35244 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.1□□□□□ -1.59
RPA3P35244 AL031584.1-201ENST00000447169 754 ntBASIC5.1□□□□□ -1.59
RPA3P35244 AC018638.3-201ENST00000461273 132 ntBASIC5.1□□□□□ -1.59
RPA3P35244 AC091180.1-201ENST00000462104 372 ntBASIC5.1□□□□□ -1.59
RPA3P35244 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.1□□□□□ -1.59
RPA3P35244 AC015864.1-201ENST00000496512 544 ntBASIC5.1□□□□□ -1.59
RPA3P35244 AC024558.1-201ENST00000505008 528 ntBASIC5.1□□□□□ -1.59
RPA3P35244 PGAM1P13-201ENST00000507497 754 ntBASIC5.1□□□□□ -1.59
RPA3P35244 AC012400.1-201ENST00000518452 381 ntBASIC5.1□□□□□ -1.59
RPA3P35244 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RPA3P35244 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.1□□□□□ -1.59
RPA3P35244 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.1□□□□□ -1.59
RPA3P35244 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.1□□□□□ -1.59
RPA3P35244 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.1□□□□□ -1.59
RPA3P35244 AC107993.1-201ENST00000591343 684 ntBASIC5.1□□□□□ -1.59
RPA3P35244 AC011493.1-201ENST00000596753 1632 ntBASIC5.1□□□□□ -1.59
RPA3P35244 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.1□□□□□ -1.59
RPA3P35244 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.1□□□□□ -1.59
RPA3P35244 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.1□□□□□ -1.59
RPA3P35244 MIR8069-1-201ENST00000616627 86 ntBASIC5.1□□□□□ -1.59
RPA3P35244 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.1□□□□□ -1.59
RPA3P35244 MIR6886-201ENST00000619864 61 ntBASIC5.1□□□□□ -1.59
RPA3P35244 MIR8069-2-201ENST00000621412 86 ntBASIC5.1□□□□□ -1.59
RPA3P35244 AC005261.6-201ENST00000623072 1387 ntBASIC5.1□□□□□ -1.59
RPA3P35244 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.1□□□□□ -1.59
RPA3P35244 CASC19-221ENST00000641309 1382 ntBASIC5.1□□□□□ -1.59
RPA3P35244 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPA3P35244 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPA3P35244 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RPA3P35244 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RPA3P35244 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPA3P35244 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RPA3P35244 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RPA3P35244 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RPA3P35244 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms