Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RPL7AP49-201ENST00000429522 581 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.32□□□□□ -1.72
COL8A2P25067 AL591438.1-201ENST00000433508 581 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 RPL19P16-201ENST00000433839 588 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 AC090018.1-201ENST00000434369 367 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 RHOT1P3-201ENST00000436571 331 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 RPL12P18-201ENST00000437175 325 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 RPL34P20-201ENST00000442771 351 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 AC016772.1-201ENST00000444170 1261 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 NDUFA5P8-201ENST00000449019 346 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 RPL37AP8-201ENST00000494116 276 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 RPS24P16-201ENST00000497294 392 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 AP001922.4-201ENST00000526967 290 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 EIF4A2P5-201ENST00000529914 499 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.32□□□□□ -1.72
COL8A2P25067 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL8A2P25067 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.32□□□□□ -1.72
COL8A2P25067 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.32□□□□□ -1.72
COL8A2P25067 MIR4691-201ENST00000583764 85 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.32□□□□□ -1.72
COL8A2P25067 FRG1EP-201ENST00000634469 770 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
COL8A2P25067 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL8A2P25067 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL8A2P25067 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL8A2P25067 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.32□□□□□ -1.72
COL8A2P25067 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.32□□□□□ -1.72
COL8A2P25067 INTS6P1-201ENST00000504674 2530 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
COL8A2P25067 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL8A2P25067 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.32□□□□□ -1.72
COL8A2P25067 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.32□□□□□ -1.72
COL8A2P25067 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL8A2P25067 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL8A2P25067 AC020633.1-201ENST00000468439 2247 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.31□□□□□ -1.72
COL8A2P25067 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL8A2P25067 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.31□□□□□ -1.72
COL8A2P25067 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL8A2P25067 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.31□□□□□ -1.72
COL8A2P25067 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL8A2P25067 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
COL8A2P25067 CASC19-221ENST00000641309 1382 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.31□□□□□ -1.72
COL8A2P25067 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL8A2P25067 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL8A2P25067 OR1L6-202ENST00000373684 1044 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 MIR585-201ENST00000384887 94 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 AL078599.1-201ENST00000402075 293 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.31□□□□□ -1.72
COL8A2P25067 HMGN2P27-201ENST00000427352 270 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC4.31□□□□□ -1.72
COL8A2P25067 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.31□□□□□ -1.72
COL8A2P25067 AL772161.1-201ENST00000439130 476 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 KNOP1P3-201ENST00000446933 426 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 TRY2P-201ENST00000448860 689 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 RN7SL443P-201ENST00000464331 290 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 RN7SL814P-201ENST00000487715 300 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.31□□□□□ -1.72
COL8A2P25067 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.31□□□□□ -1.72
COL8A2P25067 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.31□□□□□ -1.72
COL8A2P25067 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.31□□□□□ -1.72
COL8A2P25067 OR7E128P-201ENST00000532736 1024 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 MIR3934-201ENST00000579806 107 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 AC011487.3-201ENST00000593607 453 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.31□□□□□ -1.72
COL8A2P25067 AC006363.1-201ENST00000603806 463 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.31□□□□□ -1.72
COL8A2P25067 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.31□□□□□ -1.72
COL8A2P25067 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.31□□□□□ -1.72
COL8A2P25067 AL627230.1-201ENST00000613077 211 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 AL591926.8-201ENST00000616876 211 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.31□□□□□ -1.72
COL8A2P25067 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL8A2P25067 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL8A2P25067 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.31□□□□□ -1.72
COL8A2P25067 AC083843.2-201ENST00000568248 6253 ntBASIC4.31□□□□□ -1.72
COL8A2P25067 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.3□□□□□ -1.72
COL8A2P25067 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.3□□□□□ -1.72
COL8A2P25067 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.3□□□□□ -1.72
COL8A2P25067 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
COL8A2P25067 RNA5SP428-201ENST00000365129 132 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 RNA5SP223-201ENST00000365174 120 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 AL353625.1-202ENST00000366273 571 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 RNA5SP187-201ENST00000384400 119 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL8A2P25067 AL139128.1-201ENST00000413921 941 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.3□□□□□ -1.72
COL8A2P25067 DDX39BP1-205ENST00000422507 192 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.3□□□□□ -1.72
COL8A2P25067 RPL31P44-201ENST00000447680 377 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 AC090804.1-201ENST00000448870 490 ntBASIC4.3□□□□□ -1.72
COL8A2P25067 HIGD1AP8-201ENST00000453927 274 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms