Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RPS26P39-201ENST00000469206 341 ntBASIC5.34□□□□□ -1.55
CDH3P22223 ATP5LP5-201ENST00000483050 299 ntBASIC5.34□□□□□ -1.55
CDH3P22223 RN7SL629P-201ENST00000489622 285 ntBASIC5.34□□□□□ -1.55
CDH3P22223 AC093890.1-201ENST00000502554 540 ntBASIC5.34□□□□□ -1.55
CDH3P22223 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH3P22223 RFPL4AP5-201ENST00000514977 504 ntBASIC5.34□□□□□ -1.55
CDH3P22223 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.34□□□□□ -1.55
CDH3P22223 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH3P22223 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH3P22223 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH3P22223 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH3P22223 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CDH3P22223 AC127381.1-201ENST00000555979 939 ntBASIC5.34□□□□□ -1.55
CDH3P22223 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH3P22223 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH3P22223 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH3P22223 DPRXP4-201ENST00000578053 568 ntBASIC5.34□□□□□ -1.55
CDH3P22223 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH3P22223 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH3P22223 AC124856.1-201ENST00000600819 896 ntBASIC5.34□□□□□ -1.55
CDH3P22223 AC005520.3-201ENST00000602874 370 ntBASIC5.34□□□□□ -1.55
CDH3P22223 SUGT1P3-202ENST00000604259 383 ntBASIC5.34□□□□□ -1.55
CDH3P22223 AC007620.3-201ENST00000608131 497 ntBASIC5.34□□□□□ -1.55
CDH3P22223 AL512624.1-201ENST00000613638 469 ntBASIC5.34□□□□□ -1.55
CDH3P22223 AL162574.2-201ENST00000614618 657 ntBASIC5.34□□□□□ -1.55
CDH3P22223 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH3P22223 AC004808.2-201ENST00000627965 773 ntBASIC5.34□□□□□ -1.55
CDH3P22223 TMEM30CP-203ENST00000637814 1035 ntBASIC5.34□□□□□ -1.55
CDH3P22223 SAMMSON-209ENST00000641222 1100 ntBASIC5.34□□□□□ -1.55
CDH3P22223 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH3P22223 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH3P22223 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.34□□□□□ -1.56
CDH3P22223 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
CDH3P22223 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CDH3P22223 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CDH3P22223 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH3P22223 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH3P22223 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.33□□□□□ -1.56
CDH3P22223 RBPJP2-201ENST00000618187 1444 ntBASIC5.33□□□□□ -1.56
CDH3P22223 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH3P22223 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDH3P22223 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH3P22223 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH3P22223 AC009804.1-201ENST00000400949 179 ntBASIC5.33□□□□□ -1.56
CDH3P22223 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH3P22223 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH3P22223 CFL1P1-202ENST00000432948 411 ntBASIC5.33□□□□□ -1.56
CDH3P22223 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.33□□□□□ -1.56
CDH3P22223 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH3P22223 AC017099.1-201ENST00000448261 1028 ntBASIC5.33□□□□□ -1.56
CDH3P22223 NPM1P39-201ENST00000449818 867 ntBASIC5.33□□□□□ -1.56
CDH3P22223 C1DP3-201ENST00000455013 423 ntBASIC5.33□□□□□ -1.56
CDH3P22223 RPL31P53-201ENST00000457065 348 ntBASIC5.33□□□□□ -1.56
CDH3P22223 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH3P22223 RPS4XP14-201ENST00000493072 781 ntBASIC5.33□□□□□ -1.56
CDH3P22223 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH3P22223 AC104997.1-201ENST00000519761 717 ntBASIC5.33□□□□□ -1.56
CDH3P22223 IGLV2-28-201ENST00000520681 304 ntBASIC5.33□□□□□ -1.56
CDH3P22223 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH3P22223 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH3P22223 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.33□□□□□ -1.56
CDH3P22223 AC090022.1-201ENST00000546569 311 ntBASIC5.33□□□□□ -1.56
CDH3P22223 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH3P22223 AC106730.2-201ENST00000566641 540 ntBASIC5.33□□□□□ -1.56
CDH3P22223 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH3P22223 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH3P22223 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH3P22223 AL137072.1-201ENST00000603444 466 ntBASIC5.33□□□□□ -1.56
CDH3P22223 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH3P22223 AC025574.1-201ENST00000554784 1653 ntBASIC5.33□□□□□ -1.56
CDH3P22223 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH3P22223 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH3P22223 AC068870.1-201ENST00000563737 2455 ntBASIC5.33□□□□□ -1.56
CDH3P22223 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.33□□□□□ -1.56
CDH3P22223 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH3P22223 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH3P22223 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CDH3P22223 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.32□□□□□ -1.56
CDH3P22223 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH3P22223 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH3P22223 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CDH3P22223 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH3P22223 RNU6-1331P-201ENST00000363658 106 ntBASIC5.32□□□□□ -1.56
CDH3P22223 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH3P22223 RNU6-1263P-201ENST00000384601 106 ntBASIC5.32□□□□□ -1.56
CDH3P22223 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.32□□□□□ -1.56
CDH3P22223 RN7SKP97-201ENST00000410966 333 ntBASIC5.32□□□□□ -1.56
CDH3P22223 USP9YP19-201ENST00000412165 485 ntBASIC5.32□□□□□ -1.56
CDH3P22223 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH3P22223 CYCSP6-201ENST00000434498 302 ntBASIC5.32□□□□□ -1.56
CDH3P22223 AL596266.1-201ENST00000448132 400 ntBASIC5.32□□□□□ -1.56
CDH3P22223 AL606490.1-201ENST00000452266 765 ntBASIC5.32□□□□□ -1.56
CDH3P22223 RN7SL177P-201ENST00000476596 299 ntBASIC5.32□□□□□ -1.56
CDH3P22223 RPL7P39-201ENST00000481157 744 ntBASIC5.32□□□□□ -1.56
CDH3P22223 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH3P22223 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH3P22223 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.32□□□□□ -1.56
CDH3P22223 AP001804.2-201ENST00000533932 910 ntBASIC5.32□□□□□ -1.56
CDH3P22223 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH3P22223 CD24P2-201ENST00000565486 219 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms