Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC079880.2-201ENST00000603790 1213 ntBASIC5.56□□□□□ -1.52
CAPN3P20807 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CAPN3P20807 AL021918.2-201ENST00000613415 194 ntBASIC5.56□□□□□ -1.52
CAPN3P20807 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.56□□□□□ -1.52
CAPN3P20807 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CAPN3P20807 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.56□□□□□ -1.52
CAPN3P20807 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CAPN3P20807 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CAPN3P20807 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
CAPN3P20807 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CAPN3P20807 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CAPN3P20807 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.56□□□□□ -1.52
CAPN3P20807 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CAPN3P20807 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.55□□□□□ -1.52
CAPN3P20807 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.55□□□□□ -1.52
CAPN3P20807 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CAPN3P20807 GNL2P1-201ENST00000451274 2190 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CAPN3P20807 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CAPN3P20807 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CAPN3P20807 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CAPN3P20807 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CAPN3P20807 RNA5SP242-201ENST00000364171 118 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 OR6K3-202ENST00000368146 996 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CAPN3P20807 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.55□□□□□ -1.52
CAPN3P20807 AL590290.1-201ENST00000405336 380 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 RPL35AP3-201ENST00000414680 288 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.55□□□□□ -1.52
CAPN3P20807 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.55□□□□□ -1.52
CAPN3P20807 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.55□□□□□ -1.52
CAPN3P20807 AL590762.3-201ENST00000436372 640 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.55□□□□□ -1.52
CAPN3P20807 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.55□□□□□ -1.52
CAPN3P20807 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.55□□□□□ -1.52
CAPN3P20807 AL589765.3-201ENST00000446084 462 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 RPL31P44-201ENST00000447680 377 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.55□□□□□ -1.52
CAPN3P20807 RN7SL197P-201ENST00000466981 299 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 RN7SL188P-201ENST00000469842 285 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.55□□□□□ -1.52
CAPN3P20807 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.55□□□□□ -1.52
CAPN3P20807 AC105384.2-201ENST00000508433 640 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CAPN3P20807 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.55□□□□□ -1.52
CAPN3P20807 ATP5LP3-201ENST00000514223 304 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 AL671862.1-201ENST00000515851 349 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 SNORA70.11-201ENST00000515987 138 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 SNORA70.13-201ENST00000516116 138 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.55□□□□□ -1.52
CAPN3P20807 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.55□□□□□ -1.52
CAPN3P20807 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.55□□□□□ -1.52
CAPN3P20807 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.55□□□□□ -1.52
CAPN3P20807 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.55□□□□□ -1.52
CAPN3P20807 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.55□□□□□ -1.52
CAPN3P20807 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.55□□□□□ -1.52
CAPN3P20807 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.55□□□□□ -1.52
CAPN3P20807 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.55□□□□□ -1.52
CAPN3P20807 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.55□□□□□ -1.52
CAPN3P20807 MIR1273E-201ENST00000581165 102 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CAPN3P20807 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.55□□□□□ -1.52
CAPN3P20807 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.55□□□□□ -1.52
CAPN3P20807 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CAPN3P20807 AL512506.1-201ENST00000613918 449 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 OR11H2-202ENST00000641517 1085 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CAPN3P20807 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CAPN3P20807 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.55□□□□□ -1.52
CAPN3P20807 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CAPN3P20807 AL450326.2-201ENST00000421913 1962 ntBASIC5.55□□□□□ -1.52
CAPN3P20807 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.55□□□□□ -1.52
CAPN3P20807 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CAPN3P20807 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CAPN3P20807 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CAPN3P20807 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CAPN3P20807 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CAPN3P20807 AL451142.2-201ENST00000429076 2090 ntBASIC5.54□□□□□ -1.52
CAPN3P20807 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CAPN3P20807 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.54□□□□□ -1.52
CAPN3P20807 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
CAPN3P20807 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CAPN3P20807 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
CAPN3P20807 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.54□□□□□ -1.52
CAPN3P20807 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CAPN3P20807 MIR133A2-201ENST00000347538 102 ntBASIC5.54□□□□□ -1.52
CAPN3P20807 IGKV7-3-201ENST00000357453 298 ntBASIC5.54□□□□□ -1.52
CAPN3P20807 RN7SKP278-201ENST00000410504 342 ntBASIC5.54□□□□□ -1.52
CAPN3P20807 AC211486.3-201ENST00000412694 621 ntBASIC5.54□□□□□ -1.52
CAPN3P20807 AC013404.1-201ENST00000413068 249 ntBASIC5.54□□□□□ -1.52
CAPN3P20807 LINC01881-201ENST00000416103 412 ntBASIC5.54□□□□□ -1.52
CAPN3P20807 LINC01347-201ENST00000417964 355 ntBASIC5.54□□□□□ -1.52
CAPN3P20807 RNGTTP1-201ENST00000420965 728 ntBASIC5.54□□□□□ -1.52
CAPN3P20807 AL590609.2-201ENST00000421430 368 ntBASIC5.54□□□□□ -1.52
CAPN3P20807 AC023141.3-201ENST00000436698 278 ntBASIC5.54□□□□□ -1.52
CAPN3P20807 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.54□□□□□ -1.52
CAPN3P20807 TRIM60P16-201ENST00000444048 694 ntBASIC5.54□□□□□ -1.52
CAPN3P20807 RPL6P5-201ENST00000445678 828 ntBASIC5.54□□□□□ -1.52
CAPN3P20807 AC069540.1-201ENST00000446320 988 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms