Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC7.43□□□□□ -1.22
ERCC3P19447 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 Y_RNA.436-201ENST00000384097 102 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 RN7SKP281-201ENST00000410472 352 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 RN7SKP166-201ENST00000410812 305 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC7.43□□□□□ -1.22
ERCC3P19447 MRPS36P1-201ENST00000421291 307 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.43□□□□□ -1.22
ERCC3P19447 AL365220.1-201ENST00000432923 399 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 AC094019.1-201ENST00000434678 472 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 ANKRD30BP3-201ENST00000444850 1070 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 FAR2P1-206ENST00000449736 709 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 OSTCP1-201ENST00000455507 450 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 AL133244.1-201ENST00000456007 258 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 AC009963.3-201ENST00000458090 486 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 GAPDHP39-201ENST00000481866 979 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 PPP1R11P1-201ENST00000486095 376 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 NAA50-206ENST00000493454 964 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 SNX18P24-201ENST00000505249 671 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 AC098799.3-201ENST00000506095 438 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.43□□□□□ -1.22
ERCC3P19447 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.43□□□□□ -1.22
ERCC3P19447 OR5BM1P-201ENST00000512021 366 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.43□□□□□ -1.22
ERCC3P19447 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 AC036111.2-201ENST00000533247 901 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.43□□□□□ -1.22
ERCC3P19447 NDUFAF4P1-201ENST00000559425 519 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 AC005951.1-201ENST00000576706 485 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 AC122133.1-201ENST00000613964 233 ntBASIC7.43□□□□□ -1.22
ERCC3P19447 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.43□□□□□ -1.22
ERCC3P19447 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC7.43□□□□□ -1.22
ERCC3P19447 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
ERCC3P19447 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
ERCC3P19447 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.43□□□□□ -1.22
ERCC3P19447 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ERCC3P19447 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.43□□□□□ -1.22
ERCC3P19447 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
ERCC3P19447 VPS35P1-201ENST00000563400 1518 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ERCC3P19447 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.42□□□□□ -1.22
ERCC3P19447 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.42□□□□□ -1.22
ERCC3P19447 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ERCC3P19447 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
ERCC3P19447 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 AC062029.1-202ENST00000606164 3651 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 COX6B1P3-201ENST00000312310 260 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 RNA5SP435-201ENST00000364044 108 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 RNU6-317P-201ENST00000384031 107 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 RNU5A-2P-201ENST00000384337 116 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 AL451046.1-201ENST00000406097 534 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC7.42□□□□□ -1.22
ERCC3P19447 AC098592.1-201ENST00000419352 333 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 NPM1P22-201ENST00000427761 952 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 RPS29P14-201ENST00000431518 171 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 USP9YP22-201ENST00000438971 294 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 AL645936.1-201ENST00000441979 518 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 AC104306.1-201ENST00000449702 371 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 AL935212.3-201ENST00000450729 284 ntBASIC7.42□□□□□ -1.22
ERCC3P19447 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC7.42□□□□□ -1.22
ERCC3P19447 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.42□□□□□ -1.22
ERCC3P19447 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms