Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.51□□□□□ -1.53
APOA4P06727 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.51□□□□□ -1.53
APOA4P06727 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.51□□□□□ -1.53
APOA4P06727 AC008521.2-201ENST00000591021 259 ntBASIC5.51□□□□□ -1.53
APOA4P06727 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.51□□□□□ -1.53
APOA4P06727 AC009237.13-201ENST00000603193 276 ntBASIC5.51□□□□□ -1.53
APOA4P06727 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.51□□□□□ -1.53
APOA4P06727 AC006363.1-201ENST00000603806 463 ntBASIC5.51□□□□□ -1.53
APOA4P06727 AC104307.1-201ENST00000616142 196 ntBASIC5.51□□□□□ -1.53
APOA4P06727 AL118508.4-201ENST00000624142 1176 ntBASIC5.51□□□□□ -1.53
APOA4P06727 AP002967.1-201ENST00000624203 539 ntBASIC5.51□□□□□ -1.53
APOA4P06727 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
APOA4P06727 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
APOA4P06727 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
APOA4P06727 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.51□□□□□ -1.53
APOA4P06727 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
APOA4P06727 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
APOA4P06727 AC092079.1-201ENST00000558620 1985 ntBASIC5.51□□□□□ -1.53
APOA4P06727 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
APOA4P06727 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.5□□□□□ -1.53
APOA4P06727 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
APOA4P06727 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
APOA4P06727 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
APOA4P06727 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.5□□□□□ -1.53
APOA4P06727 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
APOA4P06727 YES1P1-201ENST00000418510 1628 ntBASIC5.5□□□□□ -1.53
APOA4P06727 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
APOA4P06727 RN7SKP81-201ENST00000365603 331 ntBASIC5.5□□□□□ -1.53
APOA4P06727 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
APOA4P06727 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
APOA4P06727 MIR320B1-201ENST00000390209 79 ntBASIC5.5□□□□□ -1.53
APOA4P06727 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
APOA4P06727 PPIAP9-201ENST00000403866 498 ntBASIC5.5□□□□□ -1.53
APOA4P06727 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.5□□□□□ -1.53
APOA4P06727 CR848007.2-201ENST00000424918 787 ntBASIC5.5□□□□□ -1.53
APOA4P06727 MTND6P12-201ENST00000428247 522 ntBASIC5.5□□□□□ -1.53
APOA4P06727 RPL7AP49-201ENST00000429522 581 ntBASIC5.5□□□□□ -1.53
APOA4P06727 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.5□□□□□ -1.53
APOA4P06727 AL591438.1-201ENST00000433508 581 ntBASIC5.5□□□□□ -1.53
APOA4P06727 RPL36AP39-201ENST00000445859 318 ntBASIC5.5□□□□□ -1.53
APOA4P06727 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
APOA4P06727 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.5□□□□□ -1.53
APOA4P06727 AC092691.2-201ENST00000461787 803 ntBASIC5.5□□□□□ -1.53
APOA4P06727 RN7SL809P-201ENST00000482040 297 ntBASIC5.5□□□□□ -1.53
APOA4P06727 AL049874.2-201ENST00000492636 288 ntBASIC5.5□□□□□ -1.53
APOA4P06727 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.5□□□□□ -1.53
APOA4P06727 HIGD1AP18-201ENST00000520730 278 ntBASIC5.5□□□□□ -1.53
APOA4P06727 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.5□□□□□ -1.53
APOA4P06727 TRIM51DP-201ENST00000529746 596 ntBASIC5.5□□□□□ -1.53
APOA4P06727 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.5□□□□□ -1.53
APOA4P06727 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.5□□□□□ -1.53
APOA4P06727 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.5□□□□□ -1.53
APOA4P06727 MIR4660-201ENST00000583549 74 ntBASIC5.5□□□□□ -1.53
APOA4P06727 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.5□□□□□ -1.53
APOA4P06727 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.5□□□□□ -1.53
APOA4P06727 MTCO3P22-201ENST00000603219 784 ntBASIC5.5□□□□□ -1.53
APOA4P06727 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
APOA4P06727 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.5□□□□□ -1.53
APOA4P06727 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
APOA4P06727 BX005019.1-201ENST00000561881 1810 ntBASIC5.5□□□□□ -1.53
APOA4P06727 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
APOA4P06727 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
APOA4P06727 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.5□□□□□ -1.53
APOA4P06727 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
APOA4P06727 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
APOA4P06727 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
APOA4P06727 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
APOA4P06727 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
APOA4P06727 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
APOA4P06727 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
APOA4P06727 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
APOA4P06727 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.49□□□□□ -1.53
APOA4P06727 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
APOA4P06727 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
APOA4P06727 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
APOA4P06727 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.49□□□□□ -1.53
APOA4P06727 LINC01963-201ENST00000562038 3148 ntBASIC5.49□□□□□ -1.53
APOA4P06727 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
APOA4P06727 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
APOA4P06727 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.49□□□□□ -1.53
APOA4P06727 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
APOA4P06727 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
APOA4P06727 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
APOA4P06727 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
APOA4P06727 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
APOA4P06727 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
APOA4P06727 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.49□□□□□ -1.53
APOA4P06727 RNU6-883P-201ENST00000384597 107 ntBASIC5.49□□□□□ -1.53
APOA4P06727 MIR551A-201ENST00000385042 96 ntBASIC5.49□□□□□ -1.53
APOA4P06727 CCNB2P1-201ENST00000399411 1150 ntBASIC5.49□□□□□ -1.53
APOA4P06727 HYALP1-201ENST00000417674 1279 ntBASIC5.49□□□□□ -1.53
APOA4P06727 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.49□□□□□ -1.53
APOA4P06727 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
APOA4P06727 AC079807.1-201ENST00000429993 481 ntBASIC5.49□□□□□ -1.53
APOA4P06727 RPS29P14-201ENST00000431518 171 ntBASIC5.49□□□□□ -1.53
APOA4P06727 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.49□□□□□ -1.53
APOA4P06727 AC064862.4-201ENST00000442180 334 ntBASIC5.49□□□□□ -1.53
APOA4P06727 EEF1B2P6-201ENST00000445713 673 ntBASIC5.49□□□□□ -1.53
APOA4P06727 AC099063.2-201ENST00000446360 662 ntBASIC5.49□□□□□ -1.53
APOA4P06727 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms